LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele25g0490	ATGGAGAGGATCATTGGAGGGAGGTTTAAGATGGGCCGGAAGATAGGTAGCGGCTCCTTCGGCGAAATTTATATTGCTGCCGATATTCAGACATCTGAGATTGTAGCCGTGAAGATGGAGAGCAAGAAGACTAAACACCCACAACTACTGTATGAGGCCAAGTTATATAACGCCCTTCAAGGAGGAAGTGGTGTTCCAAGTATGAAATGGTATGGTATTGATGGAGATAATCACGTCATAGTTATGGATCTTTTGGGACCAAGTCTCGAGGATCTTTTTGTATACTGCGGGGGAAAGTTTTCATTAAAAACAGTTTTGATGCTGGCTGATCAGATGCTTGCAAGGATAGAGTATTTACATTCAAAGGGATTTTTGCACAGAGACATCAAACCAGATAACTTCCTTATGGGTCTAGGGAGAAAAGCAAATCAGGTTTATATGATTGATTTTGGACTTTCAAAAAGATACAAGGATCCTACAACCAATAAGCATATTGCTTACAGAGAGAACAAAAATTTAACAGGAACTGCCCGTTATGCGAGTTGCAATACTCATTTGGGAATTGAGCAAAGTAGACGGGATGATTTGGAATCTCTTGGTTATGTTATTCTTTACTTCTTAAGAGGAAGCCTTCCTTGGCAGGGTCTAAGAGCTGCCACTAAAAAGCAAAAATATGACAAGATCTGTGAGAAGAAATTATCCACTTCAATCGAGATCCTCTGCAAGTCTTATCCTGTGGAGTTTGCTTCTTACTTCCATTATTGCCACTCTTTGACATTTGATCAACGCCCGGATTATGGATTCTTGAAGCGCCTGTTTCGTGATTTATTTACTCGTGAAGGATACGAGTCTGACTACATATTTGACTGGACCATTCTTAAATGTCAGCAATCACAACAGACAAAGATGAAGGATCAATCAACCCCTGCTGCTGCTGACGTGCCTAGCCGTGTTGAACCAAATGATGTAGATAAGAATAAAGGTGTCAACGGTTCTGCTCAAATCGCGGTGGCAAGACCATTGACAAATGTTAACGCACGCGTTAATATGCAGATCAGATCATCACGTGATGATAAGAATCTGAATGCACAGAATCAGATTGTGAAACTTCCCGTGAAAATCGGTCCATCTACATCCGCGAGGCCCAGAGTGCCAGAAAATGTGTCAAAAGCAGAGAAACCAATGGGAAGCTCAAACCCAGGTCGAGTATTTGGGCATAACAGCGGCACTTCAAGCAACCGGATTCCTTCACTACGCAGAATTTCTTCGGCCAAAAAATAG	1281	0.4192	MERIIGGRFKMGRKIGSGSFGEIYIAADIQTSEIVAVKMESKKTKHPQLLYEAKLYNALQGGSGVPSMKWYGIDGDNHVIVMDLLGPSLEDLFVYCGGKFSLKTVLMLADQMLARIEYLHSKGFLHRDIKPDNFLMGLGRKANQVYMIDFGLSKRYKDPTTNKHIAYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVILYFLRGSLPWQGLRAATKKQKYDKICEKKLSTSIEILCKSYPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFTREGYESDYIFDWTILKCQQSQQTKMKDQSTPAAADVPSRVEPNDVDKNKGVNGSAQIAVARPLTNVNARVNMQIRSSRDDKNLNAQNQIVKLPVKIGPSTSARPRVPENVSKAEKPMGSSNPGRVFGHNSGTSSNRIPSLRRISSAKK	426

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele25g0490	426	SUPERFAMILY	Protein kinase-like (PK-like)	4	290	IPR011009	-
	Lele25g0490	426	SMART	serkin_6	9	278	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele25g0490	426	MobiDBLite	consensus disorder prediction	301	328	-	-
	Lele25g0490	426	ProSitePatterns	Protein kinases ATP-binding region signature.	15	38	IPR017441	GO:0005524
	Lele25g0490	426	MobiDBLite	consensus disorder prediction	401	426	-	-
	Lele25g0490	426	PANTHER	CASEIN KINASE-RELATED	13	323	-	-
	Lele25g0490	426	FunFam	Casein kinase I isoform delta-like	1	340	-	-
	Lele25g0490	426	ProSiteProfiles	Protein kinase domain profile.	9	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele25g0490	426	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	124	136	IPR008271	GO:0004672\|GO:0006468
	Lele25g0490	426	Gene3D	Transferase(Phosphotransferase) domain 1	1	336	-	-
	Lele25g0490	426	Pfam	Protein kinase domain	10	227	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele25g0490	426	MobiDBLite	consensus disorder prediction	373	426	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele25g0490	Lele-ChrLele25	3089588	3094541	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele25g0490	8	213	EF-hand Containing Proteins	AT2G17890	28.837	1.06e-14	74.3

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CK1_CK1	Lele25g0490		Pkinase	3.1e-28	CL0016