Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0487 ATGGCCAAGATCGCTCTCGGAACCTCTCGGGAGGCTACCCAGCCCGACTGCCTCCGGGCCCTCGTCATTGAGTTCGTCACCACCTTCCTCTTCGTCTTCGCCGGTGTTGGTTCCGCCATGGCCGTCGAAAAGCTAGGAGCAGACGCACTGGTAGGGTTGTTTGCCGTGGCCGTGTCACATGCACTGGTGGTGGCCACCATGATATCGGCCGGTCACATTTCCGGCGGCCACCTCAACCCAGCCGTGACGCTCGGCCTCCTCGTGGGCGGCCACATCACCCTCGTCCGTTCCATCCTTTATTGGATCGATCAGTTGCTCGCATCCTCCCTCGCTTGTTACCTTCTTTACTACCTCTCCGGTGGACTGACAACTCCAGTGCACACGCTTGCGAGTGGCGTGGGTTACACTCAGGGACTGATATGGGAGATCATCCTAACGTTTTCATTGCTGTTCTCTGTGTATGCTACAATGGTGGATCCCAAGAAGGGAGCCATTGGTGGGCTTGGGCCGACCCTGGTTGGATTTGTTGTGGGCGCTAACATCTTGGCCGGAGGAGCCTTCTCTTCGGCCTCCATGAACCCTGCGAGATCCTTTGGGCCTGCATTGATCAGCGGGAATTGGACCGATCACTGGGTTTACTGGGTGGGCCCACTCATTGGGGGTGGCCTTGCGGGCTTCATCTATGAGACCTTCTTCATCAATAGAGCCCATGTCCTACTTCCACAAGATGAAGAAAATCATTAG 744 0.5672 MAKIALGTSREATQPDCLRALVIEFVTTFLFVFAGVGSAMAVEKLGADALVGLFAVAVSHALVVATMISAGHISGGHLNPAVTLGLLVGGHITLVRSILYWIDQLLASSLACYLLYYLSGGLTTPVHTLASGVGYTQGLIWEIILTFSLLFSVYATMVDPKKGAIGGLGPTLVGFVVGANILAGGAFSSASMNPARSFGPALISGNWTDHWVYWVGPLIGGGLAGFIYETFFINRAHVLLPQDEENH 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0487 247 SUPERFAMILY Aquaporin-like 11 240 IPR023271 -
Lele25g0487 247 Gene3D Glycerol uptake facilitator protein. 2 241 IPR023271 -
Lele25g0487 247 PANTHER AQUAPORIN-8 4 235 IPR034294 -
Lele25g0487 247 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele25g0487 247 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele25g0487 247 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele25g0487 247 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele25g0487 247 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele25g0487 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele25g0487 247 ProSitePatterns MIP family signature. 77 85 IPR022357 -
Lele25g0487 247 FunFam Probable aquaporin TIP1-1 2 244 - -
Lele25g0487 247 Pfam Major intrinsic protein 12 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele25g0487 247 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0487 Lele-ChrLele25 3077476 3078396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0487 1 245 Major Intrinsic Protein MIP AT2G25810 77.143 2.05e-130 367