Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0485 ATGTTTACAATAATACTTGTACTGATTGTTTATATAAAATTCTGTCGAACCAGTTCTTTTGAGCTTCTGAACCAAAGCATCCATCCCCAGAACTTGGATCGATCAGAACAGTCCAAGTCTTATGGGATTGACGAGCAAGTAATCAGAGCACTCCCTGTATTCGAGTTTTCTTTACTCAAAGGATCAAAAGAAGGCCTAGAATGCGTTGTTTGCCTGTCGAGATTTGAAAACAGTGAAACTCTTAGGTTGCTCCCAAAGTGCAAGCATGCTTTCCACATGAATTGCATACACATGTGGCTTGAAGGTCACTCTACTTGCCCCCACAGTAGGTGCAGGGTAGACCCAGGGGATATCAAGAGTTTCACTTCTTCAATCAGCTCAAGGTTCCTGAGAGTCCCTTTCAATTTAACAGAGGAACCAAATCTTGAAATCTTTGTACAGAGGGTGCAATCCCGTCAAGGGTCATTGAGAATCAACTCCGGCAGAGGCTTATGGAATGTGGAGGAGGGCGAGACGGAAGAAGAACTACTTATTGATAATGGTGGAAATCGGGAAATTCTGCACAAGTTCAATCACAGAATAGTTATGTCAGGTTTTGTTACGAGGAGTAGATGGAGTGATCTTACTGCGACGGATTTGCTATTCTTGAAATCGGAAATGCTCAGTGTTATGTCGAGCAGAAGCCTCGTGGGTGTTTCAGTGGTTTGTATTATTAGCAAAGAACGCCGACAATATAAGATTCTCTCTCTTCCTGCCTTCGAGAGACTGGGAGAACGATGGGATGTATCAGAAACGATGCGTCTCGAGGGAGATTTGAGTGGCGTTGGCGTTCAGTGA 837 0.4373 MFTIILVLIVYIKFCRTSSFELLNQSIHPQNLDRSEQSKSYGIDEQVIRALPVFEFSLLKGSKEGLECVVCLSRFENSETLRLLPKCKHAFHMNCIHMWLEGHSTCPHSRCRVDPGDIKSFTSSISSRFLRVPFNLTEEPNLEIFVQRVQSRQGSLRINSGRGLWNVEEGETEEELLIDNGGNREILHKFNHRIVMSGFVTRSRWSDLTATDLLFLKSEMLSVMSSRSLVGVSVVCIISKERRQYKILSLPAFERLGERWDVSETMRLEGDLSGVGVQ 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0485 278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 116 IPR013083 -
Lele25g0485 278 ProSiteProfiles Zinc finger RING-type profile. 68 110 IPR001841 -
Lele25g0485 278 CDD RING-H2_PA-TM-RING 67 107 - -
Lele25g0485 278 SUPERFAMILY RING/U-box 63 114 - -
Lele25g0485 278 Pfam RING-like zinc finger 67 96 IPR001841 -
Lele25g0485 278 FunFam E3 ubiquitin-protein ligase ATL6 31 116 - -
Lele25g0485 278 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 1 232 - -
Lele25g0485 278 SMART ring_2 68 109 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0485 Lele-ChrLele25 3072883 3074109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0485 1 235 C3H Transcription Factor Family AT2G20030 41.365 1.29e-50 169