Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0482 ATGAGTGTTGAACGCCAGAATTCTGAAGCAGAGAGCAGCTCAAACTCATTCTTCTCTCCACCGTCATCGCCCCCTTCAAGAAGGGCTCTTAAGAACTCAGTCTCACATGGTAAGTCTCAGGAACCAGAATCAAAAAAGATAAAACGCATTCGAGACTCCAATAAACATCCCGTCTACCGTGGGGTCCGTATGCGTAGTTGGGGCAAATGGGTTTCTGAAATTCGCGAGCCGCGCAAGAAATCTCGTATATGGCTGGGTACATTCTCAACCCCTGAAATGGCCGCGAGGGCACACGACGTCGCTGCCTTGAGCATCAAAGGGAACTCCCCCATTCTCAATTTTCCTCAACTAGCAGACTCGCTGCCCCGCCCTGCCTCCGTCTCTCCTCGCGATATTCAGGCAGCCGCAGCAAAAGCCGCTCAAATGGATCAGTTTGACTTGCCGTCGTCATCATCATCGGCCTCGTTAATGTCATCGTCATCTTCCATGACGTCGTTGGTTTCGGCAATGGAAATGTGCGGTGGTTCGGAGGAATTAAGCGAGATTATAGAGTTGCCGAGGTTGCAAACAAGTGAGGAGACTTGTGAGTTTAGGAAGGAGTTTGTGCTCGTGGACTATATATATGATGGGTGGATGTATCAGCCAACATGGTTACAAAGCATGGAAGATTGCGACGGGTACGTTGCGGATCAACTAGCAGTGCCTGCAGAGAGTGGAATCATAGATAACCTTGATAGTTTGCTCGGGAATTACTGA 756 0.4947 MSVERQNSEAESSSNSFFSPPSSPPSRRALKNSVSHGKSQEPESKKIKRIRDSNKHPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALSIKGNSPILNFPQLADSLPRPASVSPRDIQAAAAKAAQMDQFDLPSSSSSASLMSSSSSMTSLVSAMEMCGGSEELSEIIELPRLQTSEETCEFRKEFVLVDYIYDGWMYQPTWLQSMEDCDGYVADQLAVPAESGIIDNLDSLLGNY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0482 251 SMART rav1_2 58 121 IPR001471 GO:0003700|GO:0006355
Lele25g0482 251 FunFam Ethylene-responsive transcription factor 2 57 116 - -
Lele25g0482 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 36 192 - -
Lele25g0482 251 MobiDBLite consensus disorder prediction 1 37 - -
Lele25g0482 251 CDD AP2 59 115 IPR001471 GO:0003700|GO:0006355
Lele25g0482 251 ProSiteProfiles AP2/ERF domain profile. 58 115 IPR001471 GO:0003700|GO:0006355
Lele25g0482 251 Gene3D AP2/ERF domain 58 116 IPR036955 GO:0003700|GO:0006355
Lele25g0482 251 SUPERFAMILY DNA-binding domain 58 116 IPR016177 GO:0003677
Lele25g0482 251 MobiDBLite consensus disorder prediction 1 54 - -
Lele25g0482 251 PRINTS Ethylene responsive element binding protein signature 81 97 IPR001471 GO:0003700|GO:0006355
Lele25g0482 251 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Lele25g0482 251 MobiDBLite consensus disorder prediction 38 54 - -
Lele25g0482 251 Pfam AP2 domain 57 107 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0482 Lele-ChrLele25 3053573 3054328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0482 32 227 AP2-EREBP Transcription Factor Family AT5G11590 62.000 2.84e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele25g0482 AP2 8.5e-14 CL0081