Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0477 ATGAGACGGTCCGCGCCAATCTCGACTACGAACATCACGTTGAGGAAACGTGAGTTGATCAATTTCAATGGAAAAACAGGGTTCAGGGGAGAGTCAGAAAGGCCTACTTGTTCAGAAACTACAAGTGTGGGGGGGAAGGAGAGGGGGTTGAGTATTTGGAAAGTGGCAGGCCGAGAAAAGCAACAGCGAAAGCAGGAGGCCGAACAGCTTATATCAAAAGAAGCCATCTCGCTTGGGACTGATAGGAGAAAGAGGAATCATATTGTGAAAACAAACAAATGGTGCCTTCTTCTTCTGTCTCGTCTTTGGGGTTTCTCTTGTAACCAAACTTCTCTATCTCTATCCCAATCCCCATATACATTCCCACCAGTCCTTTTCCTCTCTACAGTTTCCCCTTCACATCTGTCATACTTTGACGGGATGATGGCGGTGAGCTCGTCCTGCAAAGATGGGAGCAAGGTGGTAATGGATAACGGCAAGTACGTGCGGTACACGCCGGAGCAGGTGGAGGCTCTGGAGAGGCTGTATCACGAATGCCCCAAACCAAGTTCCATGCGCCGTCAGCAGCTTATCAGGGAGTGTCCCATTCTCTCCAACATCGAGCCCAAGCAGATCAAGGTTTGGTTCCAGAATCGGAGATGTAGAGAGAAGCAGCGAAAAGAAGCTTCACGACTGCAAGCCGTAAACAGAAAACTGACGGCCATGAATAAACTGCTGATGGAGGAAAACGACAGATTGCAGAAACAGGTGTCGCAGCTGGTTTACGAGAACAGCTTTTTCCGGCAACAGACTCGGAATACTACTCTGGCAACCACGGACACGAGTTGCGAGTCGGTGGTGACGAGCGGTCAGCACCATTTGACACCTCAGCATCCACCAAGGGATGCAAGCCCAGCTGGACTTTTGTCCATTGCAGAGGAGACTCTTGCAGAGTTTCTTTCGAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCCATTTCTCATGGTTGCCCTGGAGTGGCAGCCCGTGCATGCGGCCTTGTGGGTCTGGAACCTACGAGGGTTGCTGAAATCCTCAAAGATCGGCCCTCATGGTGTCGTGATTGCCGAGCTGTGGATTTTCTAAATGCCATGCCCACTGGAAATGGGGGAACCATTGAACTGCTTTACATGCAGTGGTATGCCCCTACAACTTTGGCTCCAGCTCGTGACTTCTGGCTGCTGCGTTACACTTCAGTTTTGGAGGATGGTAGTCTCGTGGTCTGTGAAAGATCGCTTAACAACACTCAGAATGGTCCTACTATGCCACCAGCGCAGCATTTTGTGAGAGCAGATATTCTGCCAAGCGGGTATCTGATTAGACCTTGTGAAGGAGGTGGATCCATCATTCATATTGTTGATCACGTCAACTTAGAGCCTTGCAGTGTACCTGAAGTGTTACGCCCACTATATGAGTCATCAACGTTGCTTGTTCAAAAGACAGCTATGGCGGCTTTACGTCATTTGAGGCAAATCTCTCAAGAAACTTCTCAGCCGAATGGCACCGGATGGGGAAGAAGGCCTGCAGCTTTGCGAGCACTGAGTCAGCGTTTGAGCAGGGGCTTCAATGAAGCTGTCAACGGATTTGCAGACGATGGCTGGTCCATGTTAGAAAGCGATGGCATTGATGATGTCACCCTTCTTGTGAATTCATCTCCTAGCAAAACCATGGGGTTAAATATTGGCTACAACAATGGGTTTCTTCCCATGAGCAGTTCCGTGCTATGTGCAAAAGCATCCATGTTGTTACAGAATGTGCCTCCTGCAATTCTTCTTAGATTCTTGCGGGAGCATCGATCGGAGTGGGCAGACAGCAATATTGATGCTTACTCAGCCGCTGCCATCAAAGCTGGTCCCTGTACCTTGCCTGGGGTTCGAGCAGGAGGTTTTGGTGGTCAGGTTATTCTTCCACTGGCGCAAACAATTGAGAATGAAGAGTTTATGGAGGTCATCAAGCTTGAAAATATGGGATACTATAGAGAAGACATGACTATTCCGGGTGATATTTTCCTTGTGCAACTGTGTAGTGGAGTAGATGAGCGTGCTGTTGGCACCTGTGCAGAACTCATTTTTGCTCCCATTGATGCATCTTTCTCTGATGATGCCCCCATTTTACCTTCTGGTTTCCGCATCATACCTCTTGATTCAGGCATGGATGCTCCTACTCCGAACCGAACACTTGATCTTGCTTCTGCTCTTGAAGTTGGAACCACTGGAAACAAATTAGCTGGTGATAATCCTGGACAATCTGGGAGCACAAAATCTGTGATGACAATTGCATTTCAGTTTGCATTTGAAGTCCATCTTCAAGATAGTGTAGCAGCCATGGCTCGGCAATATGTTCGGAGTATTATTGCATCTGTTCAAAGGGTAGCATTGGCACTATCACCTTCCCACTTTGGTTCCCAAAATGGCCTTCGCCCACCGCCTGGCACTCCTGAGGCGCAAACACTTGCTCAATGGATCTGTAATAGCCATGGGAGCTATCTAGGGGTAGAAATGCTAAAATGTGAAGGTAGTGAATCCATTCTCAATTCCCTTTGGCATCACTCTGATGCAGTCTTGTGCTGCTCTTTAAAGGCTTTGCCGGTTTTCACATTTGCAAATCAAGCGGGACTTGACATGCTTGAGACAACTCTGGTTGCTCTTCAAGGCATCACTCTTGATAAAATTTTCGACGAGAATGGGAAGAAAACCCTGTTCTCTGAGTTCCCCCAGATCATGCAGCAGGGCTCTATGTGTATGCAAGGAGGTATTTGCTTGTCCAGCATGGGAAGGCCAGTGTCTTATGAGAGAGCGGTTGCATGGAAAGTAATGGATGAAGAAGAAACGGCCCATTGCATTTGTTTCATGTTCATCAACTGGTCTTTTGTCTGA 2940 0.483 MRRSAPISTTNITLRKRELINFNGKTGFRGESERPTCSETTSVGGKERGLSIWKVAGREKQQRKQEAEQLISKEAISLGTDRRKRNHIVKTNKWCLLLLSRLWGFSCNQTSLSLSQSPYTFPPVLFLSTVSPSHLSYFDGMMAVSSSCKDGSKVVMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTRNTTLATTDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRPSWCRDCRAVDFLNAMPTGNGGTIELLYMQWYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPTMPPAQHFVRADILPSGYLIRPCEGGGSIIHIVDHVNLEPCSVPEVLRPLYESSTLLVQKTAMAALRHLRQISQETSQPNGTGWGRRPAALRALSQRLSRGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPSKTMGLNIGYNNGFLPMSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSNIDAYSAAAIKAGPCTLPGVRAGGFGGQVILPLAQTIENEEFMEVIKLENMGYYREDMTIPGDIFLVQLCSGVDERAVGTCAELIFAPIDASFSDDAPILPSGFRIIPLDSGMDAPTPNRTLDLASALEVGTTGNKLAGDNPGQSGSTKSVMTIAFQFAFEVHLQDSVAAMARQYVRSIIASVQRVALALSPSHFGSQNGLRPPPGTPEAQTLAQWICNSHGSYLGVEMLKCEGSESILNSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQGITLDKIFDENGKKTLFSEFPQIMQQGSMCMQGGICLSSMGRPVSYERAVAWKVMDEEETAHCICFMFINWSFV 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0477 979 ProSiteProfiles START domain profile. 294 495 IPR002913 GO:0008289
Lele25g0477 979 FunFam Homeobox-leucine zipper protein REVOLUTA 160 215 - -
Lele25g0477 979 CDD bZIP 212 251 - -
Lele25g0477 979 ProSiteProfiles 'Homeobox' domain profile. 155 219 IPR001356 GO:0003677
Lele25g0477 979 SMART START_1 303 513 IPR002913 GO:0008289
Lele25g0477 979 Pfam START domain 304 512 IPR002913 GO:0008289
Lele25g0477 979 Gene3D - 152 226 - -
Lele25g0477 979 Pfam MEKHLA domain 838 978 IPR013978 -
Lele25g0477 979 SUPERFAMILY Bet v1-like 303 515 - -
Lele25g0477 979 CDD homeodomain 160 220 IPR001356 GO:0003677
Lele25g0477 979 Coils Coil 215 256 - -
Lele25g0477 979 Gene3D - 338 520 IPR023393 -
Lele25g0477 979 SUPERFAMILY Homeodomain-like 159 223 IPR009057 -
Lele25g0477 979 SMART HOX_1 157 223 IPR001356 GO:0003677
Lele25g0477 979 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 155 979 IPR044830 GO:0003700
Lele25g0477 979 CDD START_ArGLABRA2_like 298 513 - -
Lele25g0477 979 Pfam Homeodomain 160 218 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0477 Lele-ChrLele25 3016513 3023930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0477 156 979 Homeobox Transcription Factor Family AT4G32880 80.314 0.0 1383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele25g0477 START 1e-49 CL0209