Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0476 ATGTTCTTTGATGGATTCCTGTGCAATGGAAGATATCAGGCTCCTCGTTCTTACATAGGTAAATCTGAGGAAATTGGTATCCGAGGTTTGATTCATACGAAGAGATCAGAGCGGGGTGATCGGGATTGTTGTGCTCCGGTAATAAACATGGCTCAAACTGAATCAAAGCGGTGCATCACGTTTATGTGTGTCCTCATCATGCTGATGACGACGATGAACTTTGTGGCGTCCCATGGGAAAGAAGAAGACGAGCTTCTGTTATCGTTCAAAGCCTCCATTAACGACCCACTTCACCATCTCTCAAACTGGGTCAGTTCTTCTTCCCCTGATATCTGCCACTGGAACGGTGTCACCTGCGACAGTAACTCCCACGTTAGCGCCATCAACCTCTCCGCCAAAAACCTCTCCTCCAACAATATCTCCTCCTTCTCCTCCATATATCAACTCCCACACGTTGAACACATTGACCTCTCCGATAATCAGCTCTCTGGGGGAATCTCTTTCTCTCTCTCTTCGCTTGTCTATCTCAATCTTAGCAACAACAACTTCACGGGTCCTGTCCCATTTTCGTTTTCCTGTATCCAAATTCTGGATCTCTCGAACAACATGTTTTCCGGGGAAATATCCCCTCAAATTGGATCGCTTACGAGTCTGAAGTATGTTGATCTGGGAGGGAATGTTTTGGTGGGGAAGATCCCTGATTCTATCATTAATATGACAGGTTTAGAGTACTTGACCTTGGCTTCCAACCAGCTCGTGGGTAAAGTCCCTCCAAAAATTGGCCTTATGAAGAGCTTGAAGTGGATTTATTTCGGGTACAACAATCTCTCGGGTGAGATTCCAGAGGGAATCGGAGAACTGACGAATTTGAATCATCTTGATCTTGTTTACAACAACCTCACGGGACACATTCCCAACTCTCTTGGAAACCTCACTAATCTTGAGTATCTTTTTCTCTACCAAAACAAGCTGACAGGTCGAATTCCTTCGTCTATTTTTGAGCTTAGAAATCTTGTTTCGCTTGATCTCAGTGACAATTTTCTGTCTGGTGAGATTCTCGAGCTCGTGATTCAGCTTCAGAGACTAGAGATTCTACACCTTTTCTCCAACAACTTAACCGGCAAGATTCCAAACGCTATAACCTCTCTGCCTCGCCTCCAAGTTCTTCAGCTATGGTCTAACGGATTAACAGGTGAGATTCCTGAAGATTTGGGAAAGCATAATAACCTCACTGTCCTGGACCTTTCCACCAACAAACTTTCTGGGAAAATCCCAGATAGTTTATGTCACTCGGGCGCTCTTTACAAGCTTATCCTTTTCTCCAACTCTCTTCAAGGGGAAATACCGGATAGCTTAACCTCTTGCACAAGCTTGCACCGAGTTCGTCTTCAGAACAACAAGTTCTCCGGTGAATTACCCTCCCGACTAACTCAACTGTCACAGGTATATTTATTGGACATCTCCGGGAACCAACTTTCCGGCAGGATTGATGATAGGCCCTGGAATATGTCGTCGATTCAAATGTTGAATTTGGCTAACAACAATTTCACGGGTGAGTTACCCACCACTTTTGGTAGTACAAAATTGGAGAAACTGGACTTATCAGAAAATCGATTTTCTGGTTATATTCCACGTCGGTTTGGAAGCTTATCGGAGCTGATGCAATTGAATCTGAGCAATAACAAGCTGTATGGTGAAATACCACAAGAGCTCACATTCTGCAGGAAGCTAGTGCTTTTCGATGTCAGCAGCAATCAACTCACTGGTCAAATTCCGACGAGTCTCGGCGACATGCCGGTTCTCAGCTTGCTGGATTTATCGGACAACCAATTGTGGGGTAAAATTCCAGGGAATTTAGGAAGAGTGGAATCTCTTGTGCAGGTAAACATATCCCACAACCATTTTCACGGACATTTACCGGCCACTGGAGCTTTCCTCTCCATTAATGCCAGCGCGGTCACTGGCAACGACCTATGTGGTGGTTCCGGCAACACTTCAAGTGGGTTGCCGCCGTGCCAAAAAAGCGATACGAATACATGGTTTGTCGTACTATGGTTTGTGGTGGGACTTGCGGGGTTTGCATTAGCGGCCTTTCTAGTTACATGTTCGCGTAGAAGAAAGAGTTCGGAGCTGAAGAGAGTGGAAAGCGAAGATGGTACCTGGGAGATTCAATTTTTCCATTCCAAGTTTGCCAAATCGATCACAATGGACGATATTTTATCGTCAGCAAAAGCAGGAAACATGATCTCCAAAGGGAAGAACTGGGTTTCATACGAAGGGAAGTGCATGGCAAGCGGCATGCAATTCGAGGTGAAGGAAATCAGAGACTTAAATTCAGTTCCTTTGAGTTTCTGGGCAGACACGGTGGAGTTGGGTAAGGTGCGGCATTCAAACATTATTAAATTAATGGCACTATGCCGCTCGGGTAAAGGAGCATTTTTAGTGTATGAGGATGCAGAAGGAGAGAGTTTAAGTCAAGTTGTGAGGAATCTGAGCTGGGAAAGACGGCGGAAAATAGCCGTCGTGATTGCAAAAGCACTGAAGTTTCTGCATGCTCAATGCTCATCAGTTATTTTGGTTGGTGAGCTGTCGCCGGAAAGCATTTTCATCGACCGGAACGACATCCCACGCTTGAAGTTGAGCCCTCCGGCATTGCTCAAGGGTTCCATTTCTTCTCCTTACGTTGCCCCAGAAGCGAGGAATGGGACGGAAGTAACAGAGAAGAGCGACGTATATGGATTGGGTGTTATTCTGATAGAATTGTTGACGGGAAGAAGTGCGGGAATGGAGGAGGGAAACATAGTGGAGTGGGCCCGATATTGCTATTCGGATTGTCATTGGGGAACGTGGGTCGACCCGACAATGAAGGATGGGAAGCAGAACGGCGTCGTAGAGACGATGAACCTGGCACTGCACTGCACCGCCATGGATCCCACAGCAAGGCCATGCGCAAGCGACGTCTTCAAAGCCCTCTCTGCTGTGACCTGCACACACACTGTTCTCTGTGTTTCTGCACTCCAACCATGA 3027 0.4625 MFFDGFLCNGRYQAPRSYIGKSEEIGIRGLIHTKRSERGDRDCCAPVINMAQTESKRCITFMCVLIMLMTTMNFVASHGKEEDELLLSFKASINDPLHHLSNWVSSSSPDICHWNGVTCDSNSHVSAINLSAKNLSSNNISSFSSIYQLPHVEHIDLSDNQLSGGISFSLSSLVYLNLSNNNFTGPVPFSFSCIQILDLSNNMFSGEISPQIGSLTSLKYVDLGGNVLVGKIPDSIINMTGLEYLTLASNQLVGKVPPKIGLMKSLKWIYFGYNNLSGEIPEGIGELTNLNHLDLVYNNLTGHIPNSLGNLTNLEYLFLYQNKLTGRIPSSIFELRNLVSLDLSDNFLSGEILELVIQLQRLEILHLFSNNLTGKIPNAITSLPRLQVLQLWSNGLTGEIPEDLGKHNNLTVLDLSTNKLSGKIPDSLCHSGALYKLILFSNSLQGEIPDSLTSCTSLHRVRLQNNKFSGELPSRLTQLSQVYLLDISGNQLSGRIDDRPWNMSSIQMLNLANNNFTGELPTTFGSTKLEKLDLSENRFSGYIPRRFGSLSELMQLNLSNNKLYGEIPQELTFCRKLVLFDVSSNQLTGQIPTSLGDMPVLSLLDLSDNQLWGKIPGNLGRVESLVQVNISHNHFHGHLPATGAFLSINASAVTGNDLCGGSGNTSSGLPPCQKSDTNTWFVVLWFVVGLAGFALAAFLVTCSRRRKSSELKRVESEDGTWEIQFFHSKFAKSITMDDILSSAKAGNMISKGKNWVSYEGKCMASGMQFEVKEIRDLNSVPLSFWADTVELGKVRHSNIIKLMALCRSGKGAFLVYEDAEGESLSQVVRNLSWERRRKIAVVIAKALKFLHAQCSSVILVGELSPESIFIDRNDIPRLKLSPPALLKGSISSPYVAPEARNGTEVTEKSDVYGLGVILIELLTGRSAGMEEGNIVEWARYCYSDCHWGTWVDPTMKDGKQNGVVETMNLALHCTAMDPTARPCASDVFKALSAVTCTHTVLCVSALQP 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0476 1008 Gene3D Phosphorylase Kinase; domain 1 706 817 - -
Lele25g0476 1008 ProSiteProfiles Leucine-rich repeat profile. 129 150 IPR001611 GO:0005515
Lele25g0476 1008 Pfam Protein kinase domain 785 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0476 1008 PRINTS Leucine-rich repeat signature 410 423 - -
Lele25g0476 1008 PRINTS Leucine-rich repeat signature 550 563 - -
Lele25g0476 1008 SUPERFAMILY Protein kinase-like (PK-like) 737 991 IPR011009 -
Lele25g0476 1008 SUPERFAMILY RNI-like 129 427 - -
Lele25g0476 1008 Gene3D Ribonuclease Inhibitor 430 665 IPR032675 -
Lele25g0476 1008 FunFam Calmodulin-binding receptor kinase CaMRLK 150 257 - -
Lele25g0476 1008 Gene3D Transferase(Phosphotransferase) domain 1 820 1000 - -
Lele25g0476 1008 ProSiteProfiles Protein kinase domain profile. 743 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0476 1008 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 365 668 - -
Lele25g0476 1008 Pfam Leucine rich repeat 505 563 IPR001611 GO:0005515
Lele25g0476 1008 Pfam Leucine rich repeat 289 346 IPR001611 GO:0005515
Lele25g0476 1008 Pfam Leucine rich repeat 384 444 IPR001611 GO:0005515
Lele25g0476 1008 Pfam Leucine rich repeat N-terminal domain 83 120 IPR013210 -
Lele25g0476 1008 ProSiteProfiles Leucine-rich repeat profile. 409 431 IPR001611 GO:0005515
Lele25g0476 1008 FunFam Leucine-rich receptor-like protein kinase family protein 258 354 - -
Lele25g0476 1008 SMART LRR_typ_2 550 574 IPR003591 -
Lele25g0476 1008 SMART LRR_typ_2 359 382 IPR003591 -
Lele25g0476 1008 SMART LRR_typ_2 383 407 IPR003591 -
Lele25g0476 1008 SMART LRR_typ_2 311 335 IPR003591 -
Lele25g0476 1008 SMART LRR_typ_2 170 193 IPR003591 -
Lele25g0476 1008 SMART LRR_typ_2 239 263 IPR003591 -
Lele25g0476 1008 SMART LRR_typ_2 598 622 IPR003591 -
Lele25g0476 1008 SMART LRR_typ_2 409 431 IPR003591 -
Lele25g0476 1008 SMART LRR_typ_2 503 526 IPR003591 -
Lele25g0476 1008 SMART LRR_typ_2 287 310 IPR003591 -
Lele25g0476 1008 Gene3D Ribonuclease Inhibitor 73 134 IPR032675 -
Lele25g0476 1008 Gene3D Ribonuclease Inhibitor 135 429 IPR032675 -
Lele25g0476 1008 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 436 992 - -
Lele25g0476 1008 SUPERFAMILY L domain-like 383 641 - -
Lele25g0476 1008 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 707 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0476 Lele-ChrLele25 3009478 3012737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0476 72 991 Receptor kinase-like Gene Family AT2G25790 53.503 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Lele25g0476 Pkinase 6.8e-16 CL0016