Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0449 ATGGATCGCCAATCCTTCTTTCTTTTTGGACTCATATTTTCCTTGTCGCTTGCATCACAAGCAACCAGTGACGGACAATTACAGTTTTTTTCTCTAATGAAGAAGTCTCTGTCGGGGAAATACCTGCTAAATTGGGATGTCACGGAAGGAAAACCTGTCTGCAACTTCACTGGAGTTGTCTGCAGCAACCAAGGGGAAGTCATCAATCTCGACATCTCCGGTTGGTCACTTTCTGGAAACTTCCCTTCAGATATATGCTCCTATCTGCCAGAGTTACGTTTTCTACGTCTTGGTCGCAATCGTTTGAGAGGAAAATTCCTTGATAGCATCCTCAACTGTTCTCACTTAGAAGAGCTCAACATGAATCATGTGTACCATACAGGAAACCTTCCAGATTTCTCACCTATGAAATCTCTAAGGATCCTGGATTTGTCATACAACTCCTTCAGAGGTCAGTTCCCGATGTCAGTATTTAATCTTACCAATCTTGAGGTGCTTAACTTCAATGAGAACGCTGGTTTCAACTTATGGGAGCTGCCGGAGGACATGTATAGGATGAAAAACCTCAAGTCTGTGATCTTGTCGACATGCATGGTGCGTGGCCGAATCCCTGCATCCATAGGAAACGTTTCGACTCTGGTTGATCTTGAATTGAGTGGAAATTTTCTCACGGGTCAAATTCCTACAGAGCTTGGAATGCTGAAAAACTTGCAGCAACTTGAGCTTTACTATAACCAACTTATTGGCAATATACCCAAGGAGCTAGGAAATCTCACGGAGCTCAGAGACTTGGACATGTCAGTCAATAAGCTGTCGGGAAGTATCCCAGAATCTGTGTGTCGTCTTCCCAAGCTTGAAGTCTTGCAGCTATACAACAATAGTCTCACAGGAGAAATCCCAGGTGTGATAGCAAACTCAAAAACCTTAAGAATATTATCTCTGTATGACAATTTTTTGACCGGAAAAGTCCCAAGAAATCTGGGTCAGTTCTCAGGAATGGTAGTTCTAGATTTATCCGAGAACAAACTGTCTGGTCCATTGCCAACAGAGGTTTGCAGGGGAGGTAAACTGATGTACTTCCTTGTTCTGGATAATTTCTTTTCTGGAGAGCTACCTGACAGTTATGCAAAGTGCTGGACAATGTTGAGATTTCGAGTCAGCAATAACCATTTGGTGGGCTCAATTCCGGAGGGGCTCCTTGGACTCCCGCACGTTTCCATAATTGATTTGAGTAACAATAATTTAAGTGGTCCAATTTCCGAGACTATTGGAAATCCTAGAAACTTGTCAGAACTATTCATACAGAAGAATAGGATTTCAGGCGTTATACCTCCGACCATCACTCGAGCTACCAATCTGGTCAAGATTGATTTCAGCAACAACCTTTTGTCCGGTCCAATACCTTTTGAAATCGGCAATCTTAAAAGGCTTAATTTGCTGATGTTGCAAGGGAATAAGCTGAATTCTTCCATCCCCGGCTCACTTTCCTTATTAAAGTCCCTCAACGTTCTTGATCTCTCCAACAACCTTTTGACCGGTAGCATCCCTGAAAGTTTCTCTGATCTGCTACCGAACTCTATCAACTTTTCAAATAACTTGCTCTCTGGTCCAATTCCTCCATCGTTGATAAAAGGAGGTTTAGTCGAAAGTTTCTCGGGGAATCCTGGTCTGTGTGTGTCACCCGTCTATGCTAACTCATCAGATCAAAATTTTCCCATATGTTCAAAGACTAGCAACAAGAAGAGGCTAAGCACTTTCTGGGTAGCAGGGATTTCAGTGGTCTTGATCATAACTGGATCAGCCTTGTTTTTGAAACGTAGGTGTAGCAAAGAGAGAGCTGCGGTGGAACATGACGAAACATTGTATTCGCAATTCTTCTCGTATGAAGTGAAGAGGTTTCACAGGATAACAATTGACCAAAGGGAGATCGCCGAGGCCATGGTCGAAAAGAATATAGTGGGGCATGGAGGGTCTGGGACGGTGTACAAGATCGAGTTAAAAAGCGGTGAATTTGTTGCTGTGAAGCGGCTTTGGAGTCGAAAGTCAAAGGATTCGGTTCCCGATCAGGATAGTTTAGCTTTAGACAAGACATTGAAAACTGAGGTGGAGACCCTGGGAAATATTAGACACAAGAACATAGTCAAGCTGTACTGCTACTTCTTGAGTTTGGATTGCCGCTTGTTGGTTTATGAGTACATGCCCAATGGTAATCTTTGGGATGCTCTACATAAAGGTTCGGTCCATTTGGATTGGCCTACTCGCCATAAGATTGCACTGGGGACAGCACAGGGTCTGGCATACCTCCACCATGATTTGCTCCCTCCTATAATTCATAGAGACATCAAGTCATCTAACATCCTTCTCGATGTTGACTACCAACCCAAGGTTGCAGATTTTGGGATTGCCAAGGTATTGCAGGCAAGAGGAGGGAAGGATTCCACATCCACAGTTATTGCAGGCACATATGGTTACTTGGCACCAGAATATGCTTATTCTCCTAGAGCAACTGTCAAGTGCGATGTCTATAGTTTTGGGGTGATTTTAATGGAACTGATAACTGGGAAGAAGCCTGTGGAGGCAGAATTTGGAGAGAACAGAAACATCGTATATTGGATTTCAAACAAAGTGGAAAGCAAGGAAGGGGCTAGTGAGGTATTAGACAAGCGATTAGAAGGGTCTTACAAAGAGGAAATGATTCAGGTGCTGCGAATTGCCATCCGTTGCACCTACAAGGCTCAAGCTCTTCGACCGACCATGAAAGAGGTAGTTCAAGTGCTGATTAAGGCAGACCCGTCTAGCAAGTTGTCCAATAGGACCAAAGAAACGTCAAATGCCACTTTGACAAAGAACTCATCATTTGACCTGTAG 2868 0.4355 MDRQSFFLFGLIFSLSLASQATSDGQLQFFSLMKKSLSGKYLLNWDVTEGKPVCNFTGVVCSNQGEVINLDISGWSLSGNFPSDICSYLPELRFLRLGRNRLRGKFLDSILNCSHLEELNMNHVYHTGNLPDFSPMKSLRILDLSYNSFRGQFPMSVFNLTNLEVLNFNENAGFNLWELPEDMYRMKNLKSVILSTCMVRGRIPASIGNVSTLVDLELSGNFLTGQIPTELGMLKNLQQLELYYNQLIGNIPKELGNLTELRDLDMSVNKLSGSIPESVCRLPKLEVLQLYNNSLTGEIPGVIANSKTLRILSLYDNFLTGKVPRNLGQFSGMVVLDLSENKLSGPLPTEVCRGGKLMYFLVLDNFFSGELPDSYAKCWTMLRFRVSNNHLVGSIPEGLLGLPHVSIIDLSNNNLSGPISETIGNPRNLSELFIQKNRISGVIPPTITRATNLVKIDFSNNLLSGPIPFEIGNLKRLNLLMLQGNKLNSSIPGSLSLLKSLNVLDLSNNLLTGSIPESFSDLLPNSINFSNNLLSGPIPPSLIKGGLVESFSGNPGLCVSPVYANSSDQNFPICSKTSNKKRLSTFWVAGISVVLIITGSALFLKRRCSKERAAVEHDETLYSQFFSYEVKRFHRITIDQREIAEAMVEKNIVGHGGSGTVYKIELKSGEFVAVKRLWSRKSKDSVPDQDSLALDKTLKTEVETLGNIRHKNIVKLYCYFLSLDCRLLVYEYMPNGNLWDALHKGSVHLDWPTRHKIALGTAQGLAYLHHDLLPPIIHRDIKSSNILLDVDYQPKVADFGIAKVLQARGGKDSTSTVIAGTYGYLAPEYAYSPRATVKCDVYSFGVILMELITGKKPVEAEFGENRNIVYWISNKVESKEGASEVLDKRLEGSYKEEMIQVLRIAIRCTYKAQALRPTMKEVVQVLIKADPSSKLSNRTKETSNATLTKNSSFDL 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0449 955 MobiDBLite consensus disorder prediction 935 955 - -
Lele25g0449 955 PANTHER LEUCINE RICH REPEAT KINASE 2 207 931 - -
Lele25g0449 955 Gene3D Ribonuclease Inhibitor 305 569 IPR032675 -
Lele25g0449 955 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 24 176 - -
Lele25g0449 955 SMART serkin_6 647 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0449 955 Gene3D Ribonuclease Inhibitor 26 304 IPR032675 -
Lele25g0449 955 Gene3D Transferase(Phosphotransferase) domain 1 733 952 - -
Lele25g0449 955 PRINTS Leucine-rich repeat signature 333 346 - -
Lele25g0449 955 PRINTS Leucine-rich repeat signature 498 511 - -
Lele25g0449 955 Gene3D Phosphorylase Kinase; domain 1 630 732 - -
Lele25g0449 955 FunFam leucine-rich repeat receptor-like protein kinase TDR 733 938 - -
Lele25g0449 955 FunFam receptor protein-tyrosine kinase CEPR1 630 732 - -
Lele25g0449 955 SUPERFAMILY RNI-like 66 345 - -
Lele25g0449 955 FunFam Receptor protein-tyrosine kinase CEPR1 282 568 - -
Lele25g0449 955 FunFam Leucine-rich repeat receptor-like protein kinase 177 278 - -
Lele25g0449 955 Pfam Protein kinase domain 649 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0449 955 SMART LRR_typ_2 282 305 IPR003591 -
Lele25g0449 955 SMART LRR_typ_2 474 497 IPR003591 -
Lele25g0449 955 SMART LRR_typ_2 498 521 IPR003591 -
Lele25g0449 955 SMART LRR_typ_2 160 186 IPR003591 -
Lele25g0449 955 SMART LRR_typ_2 89 113 IPR003591 -
Lele25g0449 955 SMART LRR_typ_2 330 354 IPR003591 -
Lele25g0449 955 SMART LRR_typ_2 402 426 IPR003591 -
Lele25g0449 955 SMART LRR_typ_2 234 258 IPR003591 -
Lele25g0449 955 SUPERFAMILY Protein kinase-like (PK-like) 638 926 IPR011009 -
Lele25g0449 955 ProSitePatterns Protein kinases ATP-binding region signature. 653 675 IPR017441 GO:0005524
Lele25g0449 955 ProSiteProfiles Protein kinase domain profile. 647 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0449 955 SUPERFAMILY RNI-like 251 543 - -
Lele25g0449 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0449 Lele-ChrLele25 2824949 2828083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0449 22 943 Receptor kinase-like Gene Family AT5G49660 65.372 0.0 1231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele25g0449 Pkinase 1.8e-46 CL0016