Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0447 ATGACCAATCCGGAGTCTAGTCACCACCGCCGGACCAGAGCTCGGCCGTCTGCGGCGCGGACGCCGGCTCGGCCCAGGGTTCCACTCAGGCAGTTGCTTCGAGTGGCTTCTGTGGCTGGTGGTATTCAATTTGGCTGGGCTCTACAGCTCTCCCTTCTCACTCCTTATGTACAGCAGCTCGGGATTTCTCACGCTTGGTCCAGTATCATATGGCTCTGTGGCCCGCTTTCTGGTCTCTTCGTTCAGCCGTTGGTTGGGCTCATGAGTGATCGTTGCACCAGCCGGTTCGGCCGCCGGAGACCGTTTATCTTGGCTGGAACATTGTCGATCATTTTCTCGGTTCTGGTCATTGCTTACGCTGCTGACATTGGTTGGTTGCTCGGTGACACGGAGAATTCAAGGCCGCGGGCAGTGGGGTTTTTTGTGTTCGGCTTTTGGATTCTGGACATGGCCAACAACATGACTCAAGGTCCTTGTAGAGCTTTGCTTGCTGATCTCACTGGCAAGGATCATCGAAGGACACGTGTGGCAAATGCTTATTACTCTCTGTTCATGGCTATCGGTAACATCCTTGGTTATGCTACTGGATCATACAGTGGCTGGTTCAGAATTTTCTCTTTTACCCATACTCCTGCGTGCAATGTCAGTTGTGCAAATCTCAAGTCTGCTTTCATTTTGGACATTGTTTTCATTGCTGTCACCACATATTTCAGTATTACTGCTGCTCATGAAGTGCCTCTAAGTTCAAATGGTGCACCTCATGCAGAAGAAGCAGAAGGAGAATCAGGTAGTGCAGGAGAGGCTTTCATGTGGGAGCTATTCGGGACATTCAGATATTTTTCGGCCCCTATATGGATAATTTTGTCTGTTACTGCCTTAACTTGGATTGGATGGTTTCCGTTTATCCTATTTGATACTGATTGGATGGGCCGAGAGATTTATGGGGGTGATCCAAATGAAGGCCCTAAGTATGATGCTGGAGTTAGAATGGGAGCGCTTGGTTTATTGCTGAATTCAGTTGTTCTTGGAATAACATCATTGCTTATGGAGAAGCTTTGTCGGAAGCGAGGGGCTGGCTTTGTATGGGGAATTTCAAACATCCTAATGGCTATCTGCTTTATAGGAATGCTCGTAGTGACCTATGTAGCAAAAAACATCGGCTATCTGGGAAAAGATCTACCCCCAACTGGCGTTGTGATTGTGTCATTGATAATTTTTACAATTCTTGGGTTTCCTCTGTCGATCACTTACAGTGTTCCATATGCGTTAATTTCCTCACACATTGAGTCTTTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTAAATTTAGCAATAGTGATCCCACAGATGGTGGTGTCCCTCGGAAGTGGACCATGGGATGAGCTATTTGGTGGAGGGAACGCCCCAGCCTTTGCTGTGGCAGCTCTTGCATCACTTGTTAGTGGGCTCATTGCAATCTTGGCTATTCCTCGATCTGGTGGTCAAAAGCCCAGAAACCACACATGA 1509 0.4811 MTNPESSHHRRTRARPSAARTPARPRVPLRQLLRVASVAGGIQFGWALQLSLLTPYVQQLGISHAWSSIIWLCGPLSGLFVQPLVGLMSDRCTSRFGRRRPFILAGTLSIIFSVLVIAYAADIGWLLGDTENSRPRAVGFFVFGFWILDMANNMTQGPCRALLADLTGKDHRRTRVANAYYSLFMAIGNILGYATGSYSGWFRIFSFTHTPACNVSCANLKSAFILDIVFIAVTTYFSITAAHEVPLSSNGAPHAEEAEGESGSAGEAFMWELFGTFRYFSAPIWIILSVTALTWIGWFPFILFDTDWMGREIYGGDPNEGPKYDAGVRMGALGLLLNSVVLGITSLLMEKLCRKRGAGFVWGISNILMAICFIGMLVVTYVAKNIGYLGKDLPPTGVVIVSLIIFTILGFPLSITYSVPYALISSHIESLGLGQGLSMGVLNLAIVIPQMVVSLGSGPWDELFGGGNAPAFAVAALASLVSGLIAILAIPRSGGQKPRNHT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0447 502 TIGRFAM GPH_sucrose: sucrose/H+ symporter 27 493 IPR005989 GO:0005886|GO:0008515|GO:0015770
Lele25g0447 502 FunFam Sucrose transport protein 26 490 - -
Lele25g0447 502 PANTHER SUGAR TRANSPORTER 27 488 - -
Lele25g0447 502 CDD MFS_SLC45_SUC 32 488 - -
Lele25g0447 502 Gene3D MFS general substrate transporter like domains 28 490 IPR036259 -
Lele25g0447 502 MobiDBLite consensus disorder prediction 1 22 - -
Lele25g0447 502 SUPERFAMILY MFS general substrate transporter 30 496 IPR036259 -
Lele25g0447 502 Pfam MFS/sugar transport protein 47 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0447 Lele-ChrLele25 2800995 2805638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0447 2 498 Sucrose Transporter Gene Family AT1G09960 69.291 0.0 696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0447 25 2800995 2805638 Lele27g1638 27 21907731 21912376 hybridization
Lele25g0447 25 2800995 2805638 Lele28g0453 28 2881134 2885222 hybridization