Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0438 ATGCCCAATGTATTTACTGCTCACCATATTTTATTCGATCCCCCCTTTTTCCCCACTTCTATTTCAAAGCTTCGTTTTCGTTCCTCACGCTCTTCTTCGATTCTTTGTTTCTCTTCTCGCTCAGATATGGATACCAATGAAGGTCTAAGTATCTATCCATCGCACCGCTGTAAAACTCTTCACCTGGTTAGACATGCACAAGGGACTCACAACGTAGCGGGACAAAAAGACCACGAAGCATACATGTCTTATGATTATTTTGATGCACAATTAACCCCTCTTGGCTGGAAGCAGGTTGATAACCTGCGGGCGCACGTTCAAGCATGTGGTCTTTCCAAGAAAATAGAATTGGTGATTTCTTCTCCCTTGTTAAGGACCATGCAAACAGCAACTGGAGTCTTTGGTGGTGAAGCTTACACTGACGGGACTGATGCTCCTCCTCTAATGAAGGAAAATGTGGGACCCAGTGAACATGCTGCAATTTCTAGTCTGAATTCCCCTCCATTTATAGCAGTTGAGCTTTGCCGGGAGCTTTTGGGAGTTCATCCTTGTGATAAGAGAAGAAGCATTCATGAGTACCGGGATATGTTCCCTGCAATTGACTTTTCACAGATAGAAAGTGACGAGGACATTTTGTGGACACCTGACATTAGAGAGAAGGATGAAGAAGTTGCTGCTAGGGGGCTGAAGTTTTGGAAATGGTTATGGACACGTAAAGAGAAGGAGATAGCAATTGTTTCTCACAGTGGTTTTCTATTTCATGCCCTAAGCGCTTTTGGAAATGACTGCCATCCAACTGTGAAGAGTGAAATATGCAAACACTTTGCTAATTGTGAGCTGCGTTCAATGGTTATCGTTGACAGAGGTTTGATTGGATCAGACAAGTCAACTACAAGCTATCCTGGCAAGATTCCTCATGGCCTTGATCTTCCTACGAATATTGCTGACGAGAAAAATAAAGGGAATGGACCGACCCAGTAA 981 0.4353 MPNVFTAHHILFDPPFFPTSISKLRFRSSRSSSILCFSSRSDMDTNEGLSIYPSHRCKTLHLVRHAQGTHNVAGQKDHEAYMSYDYFDAQLTPLGWKQVDNLRAHVQACGLSKKIELVISSPLLRTMQTATGVFGGEAYTDGTDAPPLMKENVGPSEHAAISSLNSPPFIAVELCRELLGVHPCDKRRSIHEYRDMFPAIDFSQIESDEDILWTPDIREKDEEVAARGLKFWKWLWTRKEKEIAIVSHSGFLFHALSAFGNDCHPTVKSEICKHFANCELRSMVIVDRGLIGSDKSTTSYPGKIPHGLDLPTNIADEKNKGNGPTQ 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0438 326 CDD HP_PGM_like 59 130 IPR013078 -
Lele25g0438 326 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 54 292 - -
Lele25g0438 326 SMART PGAM_5 59 255 IPR013078 -
Lele25g0438 326 SUPERFAMILY Phosphoglycerate mutase-like 58 288 IPR029033 -
Lele25g0438 326 FunFam Phosphoglycerate mutase-like protein 1 54 301 - -
Lele25g0438 326 Pfam Histidine phosphatase superfamily (branch 1) 60 133 IPR013078 -
Lele25g0438 326 Gene3D - 52 302 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0438 Lele-ChrLele25 2732030 2736771 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0438 25 2732030 2736771 Lele27g1646 27 21976384 21981438 hybridization
Lele25g0438 25 2732030 2736771 Lele28g0444 28 2811732 2817195 hybridization