Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0436 ATGGAGAATCATTCCCTCGCTTCCCACCCCGATTCCCGCCATTCCTCGCCTCATTCTCAAGAAGCCGACCACGAGAATCCTTCGATGGACGATCCTCTTTTCACCACCACCACCATCAACAACCAAAAAGTGAAGTTCGTGTGCAGCTATGGCGGAAATATTCAATTTAGGAGCCATGATAATCAGCTTGCTCACGTCGGTGGCGATACCAAGATCATAACCGTTGATCGCAGCATTACGTTCTCTGCTATGATGGCGAAGCTCTCTTCTCTCTGGAATAATGCTGATGTTTTCATCAAGTACCAACTTCCCGGTGAAGATCTTGACGCTTTGATTTCGGTCACTAACGATGAGGACCTAGAGCACATGATGATCGAGTATGATCTGTCTCAACGTGCGTCGGTGAAGCCCGCTAGGTTGAAGCTGTTCCTGTTTCCACCAAAATCTTCGGCTCCGATGAGTTTCGAGTCGAACGATTTGAAACCGGAGCATCAGTGGTTTGTAGACGCTCTCAATTCCGTGCACATTCCACATGTTAAGGGATCTTCAACGTCGGCACCTATATCGTCTGCGAATCCGGATTTTCTGTCTGGATTGGATTACAAATATTCAGTTGTTTCAACGACGAAATTGCCTGATTCTGTTACTCCTGCTGCGTCCGCCATTCCGCATGTGGAGGCAAATAGTTCGCCTACGGGAACGGACGGTGGATCGGTAGATCGGCACTTCGTTGGAGAACCGGCGGGATCCCCAAATGAGATTCAGATACAGATCGAGGAGTCACAGAGATCGCATTTGGAAAAGAATGACCAGATCCTACCAAAAGGCTATGAAAACAATGGCAAAGTTAGTAAAACCATGGACCCTTACTCTCAGAAAAAACCAGAGAAAGAGGAGACGACGCCTGTTCACATAGCTCCAGCTCCGTTATCAATTCCGGCATCGGCGGCAGTTTATTCGCCTGAAAGACTCATGACAAGTGCTAGTTATTCGTTAGCGGCTTCTGCAACTGTTACTGAGCAGCCGTTGTATCTCATTGCAACCCCAGCCATAATGTACCATGCCACTGCTTTGCGAGCCATGACTGGACCTGTAGGTCAGCCATTCTATCGAGTCCCAAGAATGGTCCACACAAGTGAGTTCTACAATGGAGCTCCACTGCCATCACTTTCACATTCACATTCACAGTCCAGTATCGGGGCCAACGGCGTTGACACTAGTGCAATAGTACAGCAAAAGGTTGAGGTGGCAGAGCCTGCTGGATACCCGCAGATGGTATACGAGGACGTCGGCCGAAGGCAGGTCTTCATTGCGGCCCCGGCAAACTGGGGTGGGATGGTGCCTCCACACCTAGAGGTGGCTGCTGGAAGTAATGGGACACAAGGCGGTGGTGCAAACACTCTGAATCAAGAAGGTAAGGTTTCTAAAGCTGCTTCGGCGGTATGA 1446 0.4952 MENHSLASHPDSRHSSPHSQEADHENPSMDDPLFTTTTINNQKVKFVCSYGGNIQFRSHDNQLAHVGGDTKIITVDRSITFSAMMAKLSSLWNNADVFIKYQLPGEDLDALISVTNDEDLEHMMIEYDLSQRASVKPARLKLFLFPPKSSAPMSFESNDLKPEHQWFVDALNSVHIPHVKGSSTSAPISSANPDFLSGLDYKYSVVSTTKLPDSVTPAASAIPHVEANSSPTGTDGGSVDRHFVGEPAGSPNEIQIQIEESQRSHLEKNDQILPKGYENNGKVSKTMDPYSQKKPEKEETTPVHIAPAPLSIPASAAVYSPERLMTSASYSLAASATVTEQPLYLIATPAIMYHATALRAMTGPVGQPFYRVPRMVHTSEFYNGAPLPSLSHSHSQSSIGANGVDTSAIVQQKVEVAEPAGYPQMVYEDVGRRQVFIAAPANWGGMVPPHLEVAAGSNGTQGGGANTLNQEGKVSKAASAV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0436 481 MobiDBLite consensus disorder prediction 1 33 - -
Lele25g0436 481 SMART PB1_new 58 147 IPR000270 GO:0005515
Lele25g0436 481 MobiDBLite consensus disorder prediction 273 296 - -
Lele25g0436 481 MobiDBLite consensus disorder prediction 1 28 - -
Lele25g0436 481 CDD PB1_UP2 47 145 - -
Lele25g0436 481 Pfam PB1 domain 60 146 IPR000270 GO:0005515
Lele25g0436 481 Gene3D - 64 146 - -
Lele25g0436 481 SUPERFAMILY CAD & PB1 domains 59 154 - -
Lele25g0436 481 MobiDBLite consensus disorder prediction 459 481 - -
Lele25g0436 481 MobiDBLite consensus disorder prediction 454 481 - -
Lele25g0436 481 PANTHER OS05G0427100 PROTEIN-RELATED 9 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0436 Lele-ChrLele25 2724254 2725699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0436 43 174 MAP Kinase Kinase Kinase AT5G57610 41.791 6.27e-26 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0436 25 2724254 2725699 Lele27g1649 27 21988970 21990568 hybridization
Lele25g0436 25 2724254 2725699 Lele28g0442 28 2803461 2805073 hybridization