Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0421 ATGTCAAGGGGACAATTCAAACTAACCATCATTCATAACACAGGTCTTCTTTTTGACCCTGCAAAATGTGGTGCACTGAATTTGCAAGACAAACAAAAGCTAGTTCAAGAGATTGCTCAGCAATCAAAAGATGCCAGAAATATGCTCTACTCCTTTACCCGCAAGGAGCTTCTAGAAATAATTTGTGCTGAACTTGGCAAAGAGAGGAAATACACTGGATATACTAAGACTCAAATGATAGAGTATCTTCTTAAGATAATTTCAAGGAAATCCAAGTTTCACATAATCCAAAATAACAGTCACATTGGTTCTAAAAGGAAAAGTGGACCTCCATCTCAAGATTTACATTATGTTACTCTGGCAAATAATAAAGAGGAAAAAGTAAAATCCTTACTGACATGGAGAAAGCAATTATTGGTTGCAAAAGAAGCCAGAAGAGTTGATATACTGTGTTTACGAATATCCTTGGCTCACAGAATTCTATTAGGAGCTGAGGTATACAAGGAAGTACATAAGATTGTAGAAACTGCTCTCAAATTGCTTGACAATGAAGTGGGGCCTCAGGACCAGGAATGCTTAAGGATGACACGAGGCATTGTGAACAGGCTCTCATGTGGTGCTGAGGTTCAGAATTTGTGCTCTTATGCAGTTGAGCGTTTTGATTCAATGTTTCCTAACCTTTACCCTCACTCTGTGGAAAAGAAAGATGTACCAACATGCATGATACGTTTTGAAGAGTGCCTTCCTACCTCTGTGGTCGTTGTGCTAGGGTATGAAGATCATCTTTTAAAAGACTTTTTGGGCTGCAGGCTCTGGCACAGAACATCAACAATGGACTACTCTGAACAACCCACCTTCATTGTATTAAGGCCAGAAAAAAAGTTTAAGTTGGAAAATCTCTGTCCTTCAACTGAGTATTTTTGCAAGGCTTCTCTTTTTAGCAGCACGGGCATCCTGGGCACGGCAGAAGCTAGATGGGTCACCCCTAGTGTATCTCCTTCTAAAGTTACTAGAACTGGCGGCGACAGGGATCATATCAGATATTCGCCTCATGGATCCTCTATTACCACTTTGGACATAAACGCACAGGAAAAATACAGGATAGCGGTTGAAAATCATCATCGCTTGGAATCTGCCAACTCATTCTCTAGGGACCACCCTGCAAAATTTTTCTTCACTGATAACTACAGGAGCAGGATTGAAGGGTTCCTCCCAAAGCCTCCATCAATTGAATCTCTTACATCTAAAACTTTTGCTGCAGTTTCACCTCCCACACCTTCGAAATTGGATGAAATGAGACAAGTTACAGGTTTGGGTGGTAGAAAGCGCTTGGAGGAAAATGACTACGAGTACTCTGTCAGGGTAGTCAAATGGTTAGAGCATGAAGGTCACATTGACCAAAACTTCAGAGTAAAATTCCTGACTTGGTTCAGCCTTAAAGCTAATCCACAAGAGAGAAGGGTGGTTAGTGCTTTTGTGGATGCATTCATTGATGACCCACCAAGCTTAGTTGATCAGCTTATGCACACCTTTATGGACGAAATATGTTGCGAACAAAAACTTTGGTGA 1569 0.4092 MSRGQFKLTIIHNTGLLFDPAKCGALNLQDKQKLVQEIAQQSKDARNMLYSFTRKELLEIICAELGKERKYTGYTKTQMIEYLLKIISRKSKFHIIQNNSHIGSKRKSGPPSQDLHYVTLANNKEEKVKSLLTWRKQLLVAKEARRVDILCLRISLAHRILLGAEVYKEVHKIVETALKLLDNEVGPQDQECLRMTRGIVNRLSCGAEVQNLCSYAVERFDSMFPNLYPHSVEKKDVPTCMIRFEECLPTSVVVVLGYEDHLLKDFLGCRLWHRTSTMDYSEQPTFIVLRPEKKFKLENLCPSTEYFCKASLFSSTGILGTAEARWVTPSVSPSKVTRTGGDRDHIRYSPHGSSITTLDINAQEKYRIAVENHHRLESANSFSRDHPAKFFFTDNYRSRIEGFLPKPPSIESLTSKTFAAVSPPTPSKLDEMRQVTGLGGRKRLEENDYEYSVRVVKWLEHEGHIDQNFRVKFLTWFSLKANPQERRVVSAFVDAFIDDPPSLVDQLMHTFMDEICCEQKLW 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0421 522 PANTHER VIN3-LIKE PROTEIN 2-RELATED 17 104 IPR044514 GO:0010048|GO:0040029
Lele25g0421 522 Coils Coil 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0421 Lele-ChrLele25 2576736 2580506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0421 26 89 PHD Gene Family AT5G57380 45.312 4.60e-13 69.7