Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0413 ATGGTCTTGAATAAGCCACTCGATCTCCCTATGGAGAAAGCAGAAGAAGCTGAACGTTTGCTTGGGGTCGCTGAAAAGCTCTTATCCGATCGGGATCTTACCGGCTCAAGAGAATTTGCCATTTTGGCCCAGGAAACCGAACCTCTTCTTGAGGGTTCCGACCAAATCCTGGCCGTCGTCGACGTCCTCCTCGCCGCTGATGACCGATTAAACAACCACCACGAATGGTACGCCATTCTTCAAGTTGATCGCCGATCGGACGACATAGATCTCATCAAGAAGCAATATCGGAGGCTCGCGCTTCTCCTCCACCCCGACAAGAACAGCTTCTCCCACGCTGATCATGCGTTCAAGCTCGTCGCCGAGGCATGGGATACTCTGTCGGATCCCGCCAAAAAGTCGCTCTACGACAAGGAGCTCGGTCCCTTCTCTACGGTTGATTTGAGATCGCCCGGGTGGGCTCATCAAGAAAAATTGCCGGTCCGAAGAGCGGAAGCGGGGTCCGGTGGTGGTGGGATCCGCGGGTTTGATTTCAGGAATAATGGCACCGCCACTAGGGACGCTGGGGCCGATGAGAATTCACGACTGAATCCGTCGACCTTCTGGACGGCCTGCCCGTACTGTTATTTGTTGTGCGAGTATGATAAAATTTACGAGGGTTGCTGTCTAAGGTGCCAGAACTGTGAGAGATCATTCCATGGGGTTTCGATCCCGACTTTGCCGCCTCTTCTGGCAGGCCAGGAGGCCTATTATTGTTGCTGGGGATTCTTTCCATTAACCTTAGCCACTGCTAATTCCGCCGGCAAAGAAGCTGCGACTCCTTCTGGATTTCCAAATTGGACGCCCATGGCATCTGAATCTGGCCGGCATTCAGAGAATGGTTGGAATAATGCAGAACCCGTGGTGGCCACAAAGCCTTTGCCAAAGAAGGCGAGGGCCGGGGGTGTTTCTAATGGGATATCTTTAGGTTTGGGATCTAGTGGTCGGAAGCGAGGAAGACCGAGGAAGGCCCAGACGGAATCCTTTGCTTTCATGAACTAG 1041 0.5312 MVLNKPLDLPMEKAEEAERLLGVAEKLLSDRDLTGSREFAILAQETEPLLEGSDQILAVVDVLLAADDRLNNHHEWYAILQVDRRSDDIDLIKKQYRRLALLLHPDKNSFSHADHAFKLVAEAWDTLSDPAKKSLYDKELGPFSTVDLRSPGWAHQEKLPVRRAEAGSGGGGIRGFDFRNNGTATRDAGADENSRLNPSTFWTACPYCYLLCEYDKIYEGCCLRCQNCERSFHGVSIPTLPPLLAGQEAYYCCWGFFPLTLATANSAGKEAATPSGFPNWTPMASESGRHSENGWNNAEPVVATKPLPKKARAGGVSNGISLGLGSSGRKRGRPRKAQTESFAFMN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0413 346 Gene3D DnaJ domain 65 145 IPR036869 -
Lele25g0413 346 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 13 296 - -
Lele25g0413 346 Pfam DnaJ domain 75 137 IPR001623 -
Lele25g0413 346 PRINTS DnaJ domain signature 96 111 IPR001623 -
Lele25g0413 346 PRINTS DnaJ domain signature 112 132 IPR001623 -
Lele25g0413 346 PRINTS DnaJ domain signature 77 95 IPR001623 -
Lele25g0413 346 MobiDBLite consensus disorder prediction 285 346 - -
Lele25g0413 346 SUPERFAMILY Chaperone J-domain 70 140 IPR036869 -
Lele25g0413 346 SMART dnaj_3 74 132 IPR001623 -
Lele25g0413 346 CDD DnaJ 75 129 IPR001623 -
Lele25g0413 346 ProSitePatterns Nt-dnaJ domain signature. 117 136 IPR018253 -
Lele25g0413 346 ProSiteProfiles dnaJ domain profile. 75 140 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0413 Lele-ChrLele25 2506230 2507827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0413 16 336 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 47.024 1.96e-90 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0413 25 2506230 2507827 Lele27g1673 27 22196959 22199308 hybridization
Lele25g0413 25 2506230 2507827 Lele28g0422 28 2608414 2611385 hybridization