Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0409 ATGAAAGGTGAATATGTAGAGCAACAGGTCAAGGCCGATGCTCCTGATATGTTCTCCAAGCTTCACCACCACCATCCCTTCCCTCACCATCCTTTTCAGCTTTCTCGCGAATCTCAGACCTCTGAGGAAGATGATACTCGCAGCGCCACCCCCAACCACCCTCAAAAGCCCATGTCCGTTGAACCTTCCTCCGCCGCCGATGGCTCCAGCATTGAGGTCGTCAGGCGCCCGAGGGGCCGCCCTCCTGGCTCCAAGAACAAGCCCAAGCCCCCCGTCATCATTACTCGCGACCCCGAGCCTACCATGAGTTCCTTCATTCTCGAAGTCCCCGGCGGTACGGATGTCGTTGAAGCGATTGCTCACTTTTGTCGCCGCAAAAATACCGGTCTCTGTGTGTTAACGGGATCGGGAACCGTCGCTAATGTCACCCTCCGTCAACCCTCTACTACCCCGGGGGCTACCGTTACTTTTCACGGTCGTTTTGATATCTTATCCATATCTGCCACCTTTCTGGCCAACCAGCAATCGGGCGCTTTGCCGGCGGTTCCCAACAGCTTCACGATATCTCTGGCGGGGCCGCAGGGTCAGATCGTTGGAGGATTTGTCGCCGGCAGTTTGTTGGCGGCGGGAACCGTGTTCGTCATAGCCGCTTCCTTCAACAACCCATCCTACCACAGGTTGCCAGCCGAAGAGGACGTCAGGAACTCCGTCTCGGGAGGCGGCGGCGGAGATAGGCAGTCCCCGCCGGTGTCGGGAGGCGGTGGGGAGAGTGTTCACGCGCCTGATGATTCGTGTGGGATGTCTATGTATAGCTGTCAACTACCGTCCGATGTGATCTGGGCTCCAACAGCAAGACCACCGCCACCATACTGA 873 0.5762 MKGEYVEQQVKADAPDMFSKLHHHHPFPHHPFQLSRESQTSEEDDTRSATPNHPQKPMSVEPSSAADGSSIEVVRRPRGRPPGSKNKPKPPVIITRDPEPTMSSFILEVPGGTDVVEAIAHFCRRKNTGLCVLTGSGTVANVTLRQPSTTPGATVTFHGRFDILSISATFLANQQSGALPAVPNSFTISLAGPQGQIVGGFVAGSLLAAGTVFVIAASFNNPSYHRLPAEEDVRNSVSGGGGGDRQSPPVSGGGGESVHAPDDSCGMSMYSCQLPSDVIWAPTARPPPPY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0409 290 Gene3D - 102 237 - -
Lele25g0409 290 ProSiteProfiles PPC domain profile profile. 99 240 IPR005175 -
Lele25g0409 290 CDD DUF296 105 219 IPR005175 -
Lele25g0409 290 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 231 - -
Lele25g0409 290 MobiDBLite consensus disorder prediction 36 50 - -
Lele25g0409 290 MobiDBLite consensus disorder prediction 19 98 - -
Lele25g0409 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 281 IPR014476 GO:0003680
Lele25g0409 290 MobiDBLite consensus disorder prediction 233 262 - -
Lele25g0409 290 PIRSF ESCAROLA 12 281 IPR014476 GO:0003680
Lele25g0409 290 MobiDBLite consensus disorder prediction 51 66 - -
Lele25g0409 290 Pfam Plants and Prokaryotes Conserved (PCC) domain 105 221 IPR005175 -
Lele25g0409 290 FunFam AT-hook motif nuclear-localized protein 103 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0409 Lele-ChrLele25 2473990 2474862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0409 1 290 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 60.811 2.24e-105 306