Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0396 ATGGGAAAAGAATTTGGAACCTGGCTGCCGCAGCCGTATTTTGATTGGCAATCACCCAATTTGAGTTCCTTTGGCGCTAACCTTGACGTGGGGAAGCGAAATGATTCTGCATTTATGAGCCCTGGCATAAATATGATGTCGGAAAATTATAAAATGCCAGAGTATGCACGCTCCATGCTACCACATTCGCAGTTAGGACAGTCTAATGAACCTTGTGGTTGGTCCTATGGTTCACCTCACTTTCGACAGGTATTCATGCGTGCTCCAAACCTCACTTGGGAGAGCAAGCTCCCTTCTGGCCAGGATAAAGGTATTAAGGAGGAAATTGCACCCGAAGGGATACTGGGCTTCCCTAAGAAGCAGTTCATCGTTGTTGACCAGACTGTCAATCAAACAACATTCGTTTGTAGTCCCGGGTTTGGAAGTCCCATTCTTGCTTCTTGGCATTCAAAGCTGCATGGTCCTGACTATGTGAATGGGAATGAGCCATCTTTTAGAAGAGATTTGAATAATCTGAATGGACCACCTTTGACTGATAAAGTTGATAAAAACCAGGGAACAGAGGTCCAAAGTGAGATGCATGAAGACACGGAAGAAATCAACGCGCTACTTTACTCTGATAGTGATGGTTACACCACTGAGGATGATGAAGTTACTAGCACAGGTCATTCGCCCAGTATAATGACCACTCATGATGACCAAGACTTCTGTTTTGGACGCAATGAAGGTTTTGGGAGCTGCAATGGAGTATGCAACTCTGCTGGAAAAACAAAGAAGCGGAAGCTGTCAGACGATGGCGCTTATGATGACCTGCAGCTCATGAACAGTGTCAGTTCTCTGAATCTGAATAGATCCTTTGATAATGGATACGATGCTGAATCAAGATGTTCTAGTGGCAGCAGTCAAGGATCAGAGAACAAGAAGATGAGAATAGAGAGGATTCGAGATGTTCTAAACGTTCTGCAAACCATAATTCCCGGTGGGAAAGAAAGGGATCCAATTGGGCTTCTTGATGAAGCGATATGTTGCCTGAAATCATTGAAACTCAAGGCTAGAGCTCTAGGACTCCGTGACTTGTAA 1080 0.4454 MGKEFGTWLPQPYFDWQSPNLSSFGANLDVGKRNDSAFMSPGINMMSENYKMPEYARSMLPHSQLGQSNEPCGWSYGSPHFRQVFMRAPNLTWESKLPSGQDKGIKEEIAPEGILGFPKKQFIVVDQTVNQTTFVCSPGFGSPILASWHSKLHGPDYVNGNEPSFRRDLNNLNGPPLTDKVDKNQGTEVQSEMHEDTEEINALLYSDSDGYTTEDDEVTSTGHSPSIMTTHDDQDFCFGRNEGFGSCNGVCNSAGKTKKRKLSDDGAYDDLQLMNSVSSLNLNRSFDNGYDAESRCSSGSSQGSENKKMRIERIRDVLNVLQTIIPGGKERDPIGLLDEAICCLKSLKLKARALGLRDL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0396 359 PANTHER TRANSCRIPTION FACTOR BHLH145 8 357 IPR037546 -
Lele25g0396 359 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 298 347 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0396 Lele-ChrLele25 2400807 2401886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0396 72 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 31.973 3.27e-22 94.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0396 25 2400807 2401886 Lele27g1689 27 22302861 22303949 hybridization
Lele25g0396 25 2400807 2401886 Lele28g0405 28 2477292 2478693 hybridization