Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0392 ATGGGCTTCTTCTCTTGCAATGCTGAATCTGCCGTCGCCACTTGTGATTCTCACTACTGGGACCTCAAGAAGAAGACTCCCAACAGAACCAGGAGAAGAACTCATAAGCATAAGCTCGTTGACATCAGGCAGTTTCAGTACTCGGAGCTCCTTGCAGCCACCGGCGGCTTCTCCTCAGACAGCTTCTTGGGCAAAGGCAGCCATGGCAGTGTCTACAGAGCTACCCTCGACGACGGCAAGCTCATCGCCGCCGTCAAAAGAACAAAGTTCTCCAAGCCTCAGGTCACAAACCTCCGTAACCACTCCCCTAAGTGTACCGGATGTGCTAACTGTACTAGTCCCGCAGAGAACGAGATCGAGATTCTCTCTCGGGTTCGAAATCCTCGCCGCTTCGTCAACCTCATTGGATTTTGCACCGACTCCGGCGGCAATCAGTTAATAGTCGTTGAGTACATGCTCAACGGTTCCCTCTACGAGGCCTTGCACTCCACCACCAGACCGCCGGGTTGGAGACGGCGGGTCCGGTTAGCTTTGCAGGTGGCAAAAGCCGTGCTGGCGCTTCACTCTTCGAATCCCCCGGTGATTCACCGAGACATAAAGTCGTCCAACGTTCTGATCGACGAGAAGGGGAAGGCGAGGCTGGGCGATTTCGGTCTGGCATTAAGGGGACACGTAGAGGACGTCCGGGTGAAATGCACGCCACCGGCCGGCACGATGGGATACCTGGACCCATGCTATCTGGCGCCGGGGGATCTAAGCACGAAGAGCGACGTGTTCAGCTTTGGGATCTTGCTGCTGGAGATCATCAGCGGCAGGAACGCCATCGATTTGAATTACAGCCCGCCCTCCGTGGTGGACTGGGCCGTGCCGCTGATAAAGCAAGGGGAGTTCCTCGGAATCTGTGACCGGCGAATCGGGAAGCCATCAGACACGGCGACGATAAGGCAGCTGGGCACGTTGGCCGCAAAGTGTGTAAGGTCGACGGCGGAGAAGAGGCCGTCCATGTCGGAGGCAGTGGAGTGGCTGGAACAAGTGAGGAAGAGGATGGAGGCGACGCCCATATGGAGAGGTCTGAGGCGGCGGGAGGAGAAGAAAGCTGAATTGGGCGATAGGAGCGATCAGGAAGTGGGAAGAATAGTAAGAGGGGGAAGCAGAAGGAACGGGAAAGTGTCGAGCGTGGGTGGAGTGGAGCAAGAGAACGAGATGATCAGTGAAGCTCGCAATGGAGTGTCCAGGTCGAGATCGATGCCAAACGGCAATGTGGGCGGGATTGCGAGGAGGCCGAACAGATCAAGGTCCATGTCCATGGAGGGTTTTGCAAAGTTCACTTCACAGACAGAATTACACAAGACGGATGAGGAGCAACCCCTTCCAAACCTGATTAACAACCAACGAGAAGGTTGTTAG 1407 0.5579 MGFFSCNAESAVATCDSHYWDLKKKTPNRTRRRTHKHKLVDIRQFQYSELLAATGGFSSDSFLGKGSHGSVYRATLDDGKLIAAVKRTKFSKPQVTNLRNHSPKCTGCANCTSPAENEIEILSRVRNPRRFVNLIGFCTDSGGNQLIVVEYMLNGSLYEALHSTTRPPGWRRRVRLALQVAKAVLALHSSNPPVIHRDIKSSNVLIDEKGKARLGDFGLALRGHVEDVRVKCTPPAGTMGYLDPCYLAPGDLSTKSDVFSFGILLLEIISGRNAIDLNYSPPSVVDWAVPLIKQGEFLGICDRRIGKPSDTATIRQLGTLAAKCVRSTAEKRPSMSEAVEWLEQVRKRMEATPIWRGLRRREEKKAELGDRSDQEVGRIVRGGSRRNGKVSSVGGVEQENEMISEARNGVSRSRSMPNGNVGGIARRPNRSRSMSMEGFAKFTSQTELHKTDEEQPLPNLINNQREGC 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0392 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Lele25g0392 468 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Lele25g0392 468 SMART serkin_6 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0392 468 Pfam Protein tyrosine and serine/threonine kinase 61 340 IPR001245 GO:0004672|GO:0006468
Lele25g0392 468 Gene3D Phosphorylase Kinase; domain 1 28 151 - -
Lele25g0392 468 SUPERFAMILY Protein kinase-like (PK-like) 41 352 IPR011009 -
Lele25g0392 468 FunFam Serine/threonine-protein kinase-like protein 152 355 - -
Lele25g0392 468 ProSiteProfiles Protein kinase domain profile. 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0392 468 MobiDBLite consensus disorder prediction 444 468 - -
Lele25g0392 468 PANTHER OS01G0253100 PROTEIN 29 350 IPR045271 -
Lele25g0392 468 Gene3D Transferase(Phosphotransferase) domain 1 152 358 - -
Lele25g0392 468 MobiDBLite consensus disorder prediction 410 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0392 Lele-ChrLele25 2375785 2377191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0392 43 401 Receptor kinase-like Gene Family AT3G59420 37.403 4.67e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele25g0392 PK_Tyr_Ser-Thr 1.3e-34 CL0016