Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0382 ATGTTTATCATATACCGGCTTGAAGGAGGTTCCTATATCTGTTTTGCTGTGGTCTTCTGGTTTGCGCTGATTCTGGGCAATCTATCAGTAGTTGTGAATTTATTAGAAGGCATTGGACTAGCTGATCTGCCTGCATTGCACTATAGAGTCGACCTTGCGAGCTTATTTTGCGGCAAAATAGGACAGCTTCCTGATATGACTGCCGATCATCCAAGAACAGATGTTATGAGGAAGAAAAGGAAAGGAAGCGAGACAGATGCATCCTCAAATCTTCCAGAAATTTTGACTTCACATCATGGGAACCATGGTTCTCTGTCATCAAATTTGAAGTCTCATTACTCACTTGAAGATTGTTCCAGGTTGAAGAAGAGGTGTAAAGAAGGTGCTGATGCAGAACCGGTTGCTTCCTGTAATAAAAGACTTGCAGGCTTTGCCACCGCTCCACCCTGTGGGACGTCATCTTTGATCACGCCTGGAAGAGGTCTTAAGAGGAAGATAGGATGCATTGATGTTGCTACCCAAATGGGCCGGAAGAAGAAGATAGAGGATGATTATGCTTTTGGTGAAGCAATTGGGCAAGGCAAATTTGGATCTGTATCTTTGTGTCGGTCCAGGCTTAGTGGAGCAGAATATGCATGTAAGACCCTGAGGAAGGGGGAGGAGACAGTTCATCGAGAGGTGGAGATAATGCAACACTTATCTGGACATCCAGGGGTTGTGACGCTGCAGGCGGTGTATGAAGAAGCTGACTGCTTCCATCTTGTAATGGAGTTGTGTTCTGGAGGGCGATTGATTGATAGGATGGTTAAGGAGGGCCCTTATACAGAGCAAAGGGCTGCTAATGTACTCAAGGAAGTGATGTTAGTCATAAAGTATTGTCATGATATGGGAGTTGTGCACAGAGATATCAAACCTGAAAATATCCTGCTAGCAGCTTCGGGAAAAATAAAGCTTGCAGATTTTGGGCTGGCCATGAGAACATCTAATGGTCAGAACTTGACTGGCTTGGCTGGAAGCCCTGCATATGTTGCTCCGGAGGTATTGCTGGGTAGCTATTCTGAGAAGGTGGATGTATGGAGTGCTGGAGTTCTCCTGCATACTCTGTTAATTGGTTTTCTTCCATTTCATGGAGATTCGTTGGAAGCAGTTTTTGAGGCTATTAAGAATGTCAAACTGGATTACCAAAAGGGTATGTGGGATTTGATATCTAAGCCCGCCCGAGATCTTGTTGGGAGGATGCTGACAAGGGATGTTCCAGCAAGGATAACAGCCGATGAAGTACTTAGGCATCCATGGATACTATTCTACACAGAACCAACTCTAGAAAAACTGCCCATCAGAACAAGGTTGAAGCATCAAATAGGAGCCACTTGCCGCCTGTTTGTAGCGCCTGGACATAGGTCAGGTGGAAACAAGATACACGATGGGGAAATTTCAAGCCCGCTTTCATCCTCGGAGAGTAGCGATTCAGAAGATGATGAGGATGATGGCGTGTTGATTGATGTGCTGGCATCTGCAATTTCACATGTGAGGATATCCGAACCCAAGAGAAGCAGGTTGTGTGGACCAACAGGTCCAATAGATCAGCAAGGATCATCTAACTTGAAGGCTAACAACCTCTGTAAAGCATTTTGA 1635 0.4514 MFIIYRLEGGSYICFAVVFWFALILGNLSVVVNLLEGIGLADLPALHYRVDLASLFCGKIGQLPDMTADHPRTDVMRKKRKGSETDASSNLPEILTSHHGNHGSLSSNLKSHYSLEDCSRLKKRCKEGADAEPVASCNKRLAGFATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYAFGEAIGQGKFGSVSLCRSRLSGAEYACKTLRKGEETVHREVEIMQHLSGHPGVVTLQAVYEEADCFHLVMELCSGGRLIDRMVKEGPYTEQRAANVLKEVMLVIKYCHDMGVVHRDIKPENILLAASGKIKLADFGLAMRTSNGQNLTGLAGSPAYVAPEVLLGSYSEKVDVWSAGVLLHTLLIGFLPFHGDSLEAVFEAIKNVKLDYQKGMWDLISKPARDLVGRMLTRDVPARITADEVLRHPWILFYTEPTLEKLPIRTRLKHQIGATCRLFVAPGHRSGGNKIHDGEISSPLSSSESSDSEDDEDDGVLIDVLASAISHVRISEPKRSRLCGPTGPIDQQGSSNLKANNLCKAF 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0382 544 PANTHER SERINE/THREONINE-PROTEIN KINASE 171 453 - -
Lele25g0382 544 ProSitePatterns Protein kinases ATP-binding region signature. 191 214 IPR017441 GO:0005524
Lele25g0382 544 SUPERFAMILY Protein kinase-like (PK-like) 182 454 IPR011009 -
Lele25g0382 544 MobiDBLite consensus disorder prediction 68 93 - -
Lele25g0382 544 FunFam Serine/threonine-protein kinase PEPKR2 176 499 - -
Lele25g0382 544 MobiDBLite consensus disorder prediction 70 86 - -
Lele25g0382 544 MobiDBLite consensus disorder prediction 469 494 - -
Lele25g0382 544 ProSiteProfiles Protein kinase domain profile. 185 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0382 544 SMART serkin_6 185 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0382 544 CDD STKc_CAMK 184 432 - -
Lele25g0382 544 Pfam Protein kinase domain 185 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0382 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Lele25g0382 544 Gene3D Transferase(Phosphotransferase) domain 1 176 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0382 Lele-ChrLele25 2327533 2330527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0382 169 432 EF-hand Containing Proteins AT2G38910 43.636 3.52e-75 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele25g0382 Pkinase 5.4e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0382 25 2327533 2330527 Lele27g1701 27 22381896 22388267 hybridization
Lele25g0382 25 2327533 2330527 Lele28g0392 28 2409643 2412083 hybridization