Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0380 ATGCGAAGGTTTAGTTGGTTAACGCCGTATCGGCGTCAAGTGCTTACATCTATGGCTTTGGAACCGCCTGTTGATCAAGGAAAGTCCATGAGTAGATTATTGTCCTTTGGCCAATCATTGTCTATCAGACGAGCTTTGATGAGCTGCAATTTTGCCAAAATAAATTACCAGTTTGGAATTTCAAGAATACCTTTAAATTATCGTTGTATTCATGCCACAGCATTTCTTTCATCCATTGAACGAGACTACTATCAAATTCTTGGTGTTCCTGAAAATGCCAGTCAGGACGATATCAGGAAGGCATTTCACAGACTTGCTAAGAAGTATCATCCTGATGCAAATAAGAACAATCCATCTGCCAAGAGGAAATTTCAAGATATAAGAGAAGCTTATGAGACCCTGAGAGATTCTAAGAAGAGGGCACAGTTTGACAAGATGCGAACTTCTGATTCTGAGAACATAGAATATGAACGGGATGCCGAAGAACGGTTTAGAAATGCTTATCGGGCTCACTTTTCTGATTCATTTCATAAAGTTTTCTCTGAGATGTTTGAAGAAGCAACCACTCATTCTGCGTCAAATATTGAGGTTGAGATATCACTTTCTTTCTCAGAAGCTGTTAAGGGGTGCACAAAAAATGTGTCTTTTGATGCAATTGTTCCCTGTGATTTTTGTGATGGGCGAGGCTATTCGCACAATGCAAAGGCAATTGTTTGTCCAACATGCAGGGGCATAGGCAAAGTTACAATCCCTCCATTTACATCAACATGCATCACTTGTAGAGGATCAGGCCGAGTCATCAAGGATCATTGTCAATCTTGTGGAGGATCTGGGGTGGTAGAAGGCATCAAAGAGGTTAAAGTTACTGTACCAGCAGGTGTGGATGCAGGAGATACAATTCATGTGCCAGAAGCTGGGAATGCTGCTGGACGTGGAGGTCGACCTGGAAGTCTTTATATTAAAATAAAGGTGGCTAAGGATCCTGTTTTTACCAGAGATGGTGCAGATATATATGTGGAGTCTAACATCAGCTTTACACAAGCTATTCTTGGTGGTGAAGTTGAGGTGCCTACTTTATCAGGGAAGACGCTAGTAAAAATACCTAAGGGTGTTCAACCAGGACAGCTTCTGATATTAAGAGGCAAAGGACTTCCAAAGCATGGTTTCTTTGTAGACCATGGAGATCAGTTTGTGCGTTTCCGTGTTAACTTCCCCACTGTAATTAATGAACGACAACGAGCCATTCTAGGAGAACTTGCAAAGGAGGAAATAAAGGAGGGATACAATTCACAGATTGAAGGAAATTGGTGGCAGCAAATTCTTGAATACGTGACGGGTTCAAAGTTTATGTTGGAACTATCCATGCTGATGTTAGTTCTCCTCTTCATCAATAAATTGTTGAGCCGATAA 1410 0.4121 MRRFSWLTPYRRQVLTSMALEPPVDQGKSMSRLLSFGQSLSIRRALMSCNFAKINYQFGISRIPLNYRCIHATAFLSSIERDYYQILGVPENASQDDIRKAFHRLAKKYHPDANKNNPSAKRKFQDIREAYETLRDSKKRAQFDKMRTSDSENIEYERDAEERFRNAYRAHFSDSFHKVFSEMFEEATTHSASNIEVEISLSFSEAVKGCTKNVSFDAIVPCDFCDGRGYSHNAKAIVCPTCRGIGKVTIPPFTSTCITCRGSGRVIKDHCQSCGGSGVVEGIKEVKVTVPAGVDAGDTIHVPEAGNAAGRGGRPGSLYIKIKVAKDPVFTRDGADIYVESNISFTQAILGGEVEVPTLSGKTLVKIPKGVQPGQLLILRGKGLPKHGFFVDHGDQFVRFRVNFPTVINERQRAILGELAKEEIKEGYNSQIEGNWWQQILEYVTGSKFMLELSMLMLVLLFINKLLSR 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0380 469 FunFam Chaperone protein dnaJ 1, mitochondrial 325 432 - -
Lele25g0380 469 PRINTS DnaJ domain signature 84 102 IPR001623 -
Lele25g0380 469 PRINTS DnaJ domain signature 102 117 IPR001623 -
Lele25g0380 469 PRINTS DnaJ domain signature 119 139 IPR001623 -
Lele25g0380 469 Pfam DnaJ domain 82 144 IPR001623 -
Lele25g0380 469 Gene3D - 326 433 - -
Lele25g0380 469 SUPERFAMILY HSP40/DnaJ peptide-binding domain 192 335 IPR008971 GO:0006457|GO:0051082
Lele25g0380 469 CDD DnaJ 82 136 IPR001623 -
Lele25g0380 469 ProSiteProfiles dnaJ domain profile. 82 147 IPR001623 -
Lele25g0380 469 SUPERFAMILY Chaperone J-domain 81 182 IPR036869 -
Lele25g0380 469 Gene3D - 193 323 - -
Lele25g0380 469 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 48 423 - -
Lele25g0380 469 ProSiteProfiles Zinc finger CR-type profile. 209 283 IPR001305 GO:0031072|GO:0051082
Lele25g0380 469 Pfam DnaJ central domain 222 278 IPR001305 GO:0031072|GO:0051082
Lele25g0380 469 CDD DnaJ_C 193 406 - -
Lele25g0380 469 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Lele25g0380 469 CDD DnaJ_zf 222 278 IPR001305 GO:0031072|GO:0051082
Lele25g0380 469 SUPERFAMILY HSP40/DnaJ peptide-binding domain 329 415 IPR008971 GO:0006457|GO:0051082
Lele25g0380 469 Hamap Chaperone protein DnaJ [dnaJ]. 79 435 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lele25g0380 469 Pfam DnaJ C terminal domain 195 405 IPR002939 -
Lele25g0380 469 SMART dnaj_3 81 139 IPR001623 -
Lele25g0380 469 Gene3D - 252 285 - -
Lele25g0380 469 Gene3D - 217 251 - -
Lele25g0380 469 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 209 280 IPR036410 -
Lele25g0380 469 Gene3D DnaJ domain 79 192 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0380 Lele-ChrLele25 2314556 2321637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0380 78 148 C2H2 Transcription Factor Family AT1G74250 38.158 7.16e-08 53.1