Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0376 ATGAATGAGTACTTGGCCGTGCTCCGATCCTTGATGCCTCCTTCTTATGTTCAAAGGGGTGACCAAGCTTCTATAATTGGAGGCGCCATTAACTTCGTAAAGGAGATGGAACAACATCTACAGTCTACGAAGGGCCAAACCAAAACAAGGCCACGCACAGAACACAGCCCCTTCGCCGAGTTCTTCACGTTCCCACAGTACACAACACAGGCAACTCAGAGCAGCACTGGCTGTGCGGCCGCGAACGACGCCGTGATGGTACACAACCAGAAGGAGGTTGGAGCGGCCGACATAGAAGTGAGCTTGGTGGACGGCCATGCCAACCTCAAGATTCTCTCCAAGAAACGGCCGGGCCAGCTTGTGAAGATGGTTGTAGGGCTTCAGAGTCTCAGACTCTGCATTCTTCACCTTAACGTTACTACAACTCTTGACGATGTGGTTCTGTACTCTGTTAGCGTAAAGGTTGAGGATGAGAGTCATTTGAACACAGTAGATGAAATTGCAGCCGCTGTGAATCAACTAATGCGCATAATTCAAGAAGAAGCTGTTTTCTTTTGA 558 0.4928 MNEYLAVLRSLMPPSYVQRGDQASIIGGAINFVKEMEQHLQSTKGQTKTRPRTEHSPFAEFFTFPQYTTQATQSSTGCAAANDAVMVHNQKEVGAADIEVSLVDGHANLKILSKKRPGQLVKMVVGLQSLRLCILHLNVTTTLDDVVLYSVSVKVEDESHLNTVDEIAAAVNQLMRIIQEEAVFF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0376 185 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 52 IPR036638 GO:0046983
Lele25g0376 185 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 36 IPR011598 GO:0046983
Lele25g0376 185 PANTHER MAX DIMERIZATION, MAD 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0376 Lele-ChrLele25 2289409 2290153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0376 1 155 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 55.030 2.70e-54 173
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0406 01 2385240 2386842 Lele25g0376 25 2289409 2290153 CCT
Lele02g0406 02 2363737 2365497 Lele25g0376 25 2289409 2290153 CCT
Lele03g0418 03 2390217 2392480 Lele25g0376 25 2289409 2290153 CCT
Lele04g0413 04 2451602 2452354 Lele25g0376 25 2289409 2290153 CCT
Lele25g0376 25 2289409 2290153 Lele27g1707 27 22431456 22432519 hybridization
Lele25g0376 25 2289409 2290153 Lele28g0386 28 2373710 2374784 hybridization