Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0357 ATGGCTATTCACCATTTCGGCGACACCACACTCACCAAAGTGTTCGTGGGAGGACTAGCTTGGGAGACTCCCACTCAAGAACTGCGCAACTATTTCGAGCAGTTCGGACATATTCTTGAAGCTGTTATCATCAGCGATAAGCATACCGGAAAGTCTAAAGGCTATGGCTTCGTCACTTTCCGTGATCCAGACTCAGCAAGAAAAGCCTGCGCTGATCCCAAACCAATGATATATGGAAGAAGGGCAAATTGCAACATTGCTTCTCTGGGACGGCCCCCACCTCCACCTTCATCTCCGCGAACGAATATAATAGTACAAGACGGTGGTAAAGAAGTCACAGTACGAGAAACGCCGGCCTACAATGGAGTTCCGGCAGCGGCAGCAGCACCTTTGATGTACTCAGCCGCGTATAGCTATCCCACCTACACTACTGATTACGGGTACCCCCAATTTAGAAAATCGAGAGAAGCTAGTTCTTTATACATAGATGCAGTCAAAGTGCTGCTGTATTCATTGGCCCCCACAAATGCATACTAG 537 0.4823 MAIHHFGDTTLTKVFVGGLAWETPTQELRNYFEQFGHILEAVIISDKHTGKSKGYGFVTFRDPDSARKACADPKPMIYGRRANCNIASLGRPPPPPSSPRTNIIVQDGGKEVTVRETPAYNGVPAAAAAPLMYSAAYSYPTYTTDYGYPQFRKSREASSLYIDAVKVLLYSLAPTNAY 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0357 178 CDD RRM_RBM24_RBM38_like 12 87 - -
Lele25g0357 178 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 71 IPR000504 GO:0003723
Lele25g0357 178 SUPERFAMILY RNA-binding domain, RBD 11 114 IPR035979 GO:0003676
Lele25g0357 178 Gene3D - 6 90 IPR012677 -
Lele25g0357 178 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 89 IPR000504 GO:0003723
Lele25g0357 178 SMART rrm1_1 13 85 IPR000504 GO:0003723
Lele25g0357 178 PANTHER BOULE-RELATED 6 149 IPR037366 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0357 Lele-ChrLele25 2194172 2196020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0357 8 88 C2H2 Transcription Factor Family AT2G19380 40.741 9.24e-17 75.1