Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0354 ATGGATAAATTATGCTGTTTTAAGTCTTCCTACTCTCAGCTTGTCGCTTCACGTTCTTCATCAAGCACTGGTAAGGGGAAAAATAATGAAGGATCAATAAAGTATGGTTTTTGCCTAGTAAAAGGGAGAGCTGATCACCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATTCAGGGACAAGAGTTAGGGTTGTTTGCCATTTATGATGGCCATTTAGGAGACCGCGTACCTGCCTACTTACAGAAACATTTGCTTACCAATATCATAAAGGAGGAGGAATTCTGGCAAGACCCCACTGGATCCATCTCAAAAGCTTATGAGCGAACAGATCAGGCAATTCTTGCAAATAGTTCTGATTTGGGGCGTGGTGGGTCTACTGCTGTAACTGCAATATTGATCAATGGGCAAAGGTTGTGGATAGCTAATGTTGGAGATTCACGAGCAGTTCTTTCAAGAAAAGGTCATGCTGAGCAAATGACTATAGACCATGAACCCAACACTGAACGAGGCAGCATTGAGAATAAAGGTGGTTTTGTCTCCAACTTACCAGGTGATGTGCCTAGAGTAAATGGACAGTTAGCTGTATCACGTGCATTTGGAGACAAGAGCCTTAAGTCACATTTACGGTCAGACCCTGATGTACGGAATACTGCTATAAATTCTGATATCGATATTTTAATCCTGGCAAGTGATGGACTTTGGAAGGTTATGTCTAATCAAGAGGCAGTTGATATTGCTAGAAGGATGAAAGACCCACAGAAAGCAGCTAAGCAATTAACGGCTGAAGCATTGAAAAGAGATAGTAAAGATGATATATCTTGTGTTGTGGTTAGGTTTAGGGGGTTATGGTTGGAGGAACGGACATTTTTTGAATATCTAGATTCCTACCGAGAATCAAAAGAGATTAGAGCTATGATATATAAAGTTGCTGGTTGCGCTTTGCGAGCTGGTTTGCTGGCTGTCGATCTGGATTTCGATGAACAGTTTCATGCGAAATGACCTATGAAGAGCACCCCCTTCGAGATGCACCCTCACCAAATGGACAAGAGAATTGCTCAGAACTGTAGAACGAGACACGGAAGTCAGTTCTCAGAACCATCAACTACTAAAGACATTGTAGTTGCCACCGGGCATTCATCCCAACTTGATTCATTTCAAGACGTTCAAGATCCCAAATACAATCCTGAGAGCAAGTATTTTGGTCATAGTAGGAGGAAGACACCAGTGTGGGTGCCAGAAACGTTCTTTGATACCAAAGATGGCAAAAGTGCACAGATGGGACAGAGGAGAGAAATTCGATGCAATATTCAAACATATTCAACAGCCATACAATGA 1341 0.4206 MDKLCCFKSSYSQLVASRSSSSTGKGKNNEGSIKYGFCLVKGRADHPMEDYHVAKFVQIQGQELGLFAIYDGHLGDRVPAYLQKHLLTNIIKEEEFWQDPTGSISKAYERTDQAILANSSDLGRGGSTAVTAILINGQRLWIANVGDSRAVLSRKGHAEQMTIDHEPNTERGSIENKGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVRNTAINSDIDILILASDGLWKVMSNQEAVDIARRMKDPQKAAKQLTAEALKRDSKDDISCVVVRFRGLWLEERTFFEYLDSYRESKEIRAMIYKVAGCALRAGLLAVDLDFDEQFHAKXPMKSTPFEMHPHQMDKRIAQNCRTRHGSQFSEPSTTKDIVVATGHSSQLDSFQDVQDPKYNPESKYFGHSRRKTPVWVPETFFDTKDGKSAQMGQRREIRCNIQTYSTAIQ 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0354 446 SUPERFAMILY PP2C-like 32 283 IPR036457 -
Lele25g0354 446 SMART PP2C_SIG_2 45 281 IPR001932 -
Lele25g0354 446 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Lele25g0354 446 CDD PP2Cc 33 281 IPR001932 -
Lele25g0354 446 Gene3D - 29 286 IPR036457 -
Lele25g0354 446 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Lele25g0354 446 FunFam Probable protein phosphatase 2C 39 25 282 - -
Lele25g0354 446 PANTHER PROTEIN PHOSPHATASE 27 281 - -
Lele25g0354 446 SMART PP2C_4 26 279 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0354 Lele-ChrLele25 2163198 2170213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0354 1 282 PP2C-type Phosphatase Gene Family AT1G22280 72.222 1.23e-149 425