Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0353 ATGACATCAAAACAAAGCGCATCATCGACTAATATTATTATAAATAAAAGTGGCATCGTGGGTACTCATGTTCTTATATTTGTGGGATGTGGGGCTGGTCTGGCCAGTAACGTGGAGCAGCTTAACATGGTAGGAGTAGCAATTGCAGCGGGTCTTTCTTTGACTGTGGCTATTTATTCAGTTGGTCATATTTCCGTTGGCGACTTCAATCCTGCAGTCTCTATAGCCGCCGCTGTTGCTCACAAGCTTCCATTCAAACATGCAGACATTAGGGTGGTGGTGACTCAGTACTCGAGTTCAACGAGTCATCTTGAGGATATCGCATGGGAGTTCATAGCCACTTTCATACTTATGTTCACCATTTGTGCTGTTGCCAATGATCACAGGGGAGTAGGAAATGAACACAGAAGATGCCTGTCCAATGAGGCTTCATCATCCCAGTTTCCCCCGACATCAGCCGCAACAGAATTCTCCAACTCTGTTCATATTTGA 492 0.4492 MTSKQSASSTNIIINKSGIVGTHVLIFVGCGAGLASNVEQLNMVGVAIAAGLSLTVAIYSVGHISVGDFNPAVSIAAAVAHKLPFKHADIRVVVTQYSSSTSHLEDIAWEFIATFILMFTICAVANDHRGVGNEHRRCLSNEASSSQFPPTSAATEFSNSVHI 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0353 163 PANTHER AQUAPORIN NIP2-1 19 133 IPR034294 -
Lele25g0353 163 Gene3D Glycerol uptake facilitator protein. 17 90 IPR023271 -
Lele25g0353 163 SUPERFAMILY Aquaporin-like 20 131 IPR023271 -
Lele25g0353 163 Pfam Major intrinsic protein 19 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele25g0353 163 Gene3D Glycerol uptake facilitator protein. 91 139 IPR023271 -
Lele25g0353 163 PRINTS Major intrinsic protein family signature 13 32 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele25g0353 163 PRINTS Major intrinsic protein family signature 50 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele25g0353 163 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Lele25g0353 163 MobiDBLite consensus disorder prediction 142 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0353 Lele-ChrLele25 2157181 2158987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0353 19 133 Major Intrinsic Protein MIP AT4G18910 34.899 1.85e-17 74.7