Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0331 ATGTTGTTGGGGAAGAGACCTCGTCCTCCAATGAAGAGGACCACAAGCCTGTCAGATATCAGCGTGGATCTCAGCACCACCCCCGATCCCAACCGGCAGATTGCCGGTGGGTTCAGTAATGGACCCTATCAGAGGGCGGTGGTGGCCGCCGATACCGTGTCGCAGACAGCCCATGGAAGGCACTCCGCCGACTTCACTCGGCCCCCTGACTTCTTGCGTTCTTGCTCCCTCTGCAAACGTCCCCTGGTACCCACCCGTGACATCTACATGTACAGAGGGGATAGCGCTTTCTGCAGCGTGGAATGCCGTCAGCAGGCGATGAATCGGGACGAGAGGAAGGAGAAGTGCTCGTTGGCGTCAAAGAAAAAGATTGCGGCTCATCATTCTGGCGGATCCAAAGTCACCTTTAATGGCGAAACCGTGGGCGCCTTATGCGGTGTGGGGTCAGAGCAGGCAGGTAATGCGGGGGTGAGCCGTCATTGGGGCCACGAAGCACGTGTTTTTATTGAGGGCGTGGAAGATATGCCTTCCAAATCTGAGCAACTGTCAAGTCAATGGCAGGGGGAAACAGAAGCTCGGAAATGGGATATTGCAATTGACAACATATCAGAATGGCCGATCAATTTTAACAATAACTATGCCAATGTGCTGCTTATTGTAGAGATGGCCGAGATAACTCATGTTGATCCAGTTTGGCCTGGTTGGGGTCATGCGTCAGAAAATCCTGAACTTCCTGAAGCATTGAGTGCAAAGGGAATTATATTTCTTGGACCTCCTTCCTTATCCATGGCTGCATTGGGTGATAAAATTGATTCATCATTGATTGCTCAAGTGGCAGAAGTGCCGACCCTTCCATGGAGTGGTTCTCATGCAATTTTCAATCTTCAGCTGGAGTAA 897 0.5151 MLLGKRPRPPMKRTTSLSDISVDLSTTPDPNRQIAGGFSNGPYQRAVVAADTVSQTAHGRHSADFTRPPDFLRSCSLCKRPLVPTRDIYMYRGDSAFCSVECRQQAMNRDERKEKCSLASKKKIAAHHSGGSKVTFNGETVGALCGVGSEQAGNAGVSRHWGHEARVFIEGVEDMPSKSEQLSSQWQGETEARKWDIAIDNISEWPINFNNNYANVLLIVEMAEITHVDPVWPGWGHASENPELPEALSAKGIIFLGPPSLSMAALGDKIDSSLIAQVAEVPTLPWSGSHAIFNLQLE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0331 298 MobiDBLite consensus disorder prediction 1 40 - -
Lele25g0331 298 Pfam zinc-finger of the FCS-type, C2-C2 66 113 IPR007650 -
Lele25g0331 298 MobiDBLite consensus disorder prediction 14 38 - -
Lele25g0331 298 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 210 292 - -
Lele25g0331 298 ProSiteProfiles Biotin carboxylation domain profile. 120 298 IPR011764 -
Lele25g0331 298 Gene3D - 189 268 - -
Lele25g0331 298 Pfam Biotin carboxylase, N-terminal domain 210 263 IPR005481 -
Lele25g0331 298 Gene3D - 269 297 - -
Lele25g0331 298 ProSiteProfiles Zinc finger FLZ-type profile. 70 114 IPR007650 -
Lele25g0331 298 SUPERFAMILY PreATP-grasp domain 209 266 IPR016185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0331 Lele-ChrLele25 2000903 2006905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0331 210 291 Acyl Lipid Metabolism Gene Families AT1G36180 82.927 6.26e-41 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0331 25 2000903 2006905 Lele27g1755 27 22736017 22739754 hybridization
Lele25g0331 25 2000903 2006905 Lele28g0346 28 2105859 2108724 hybridization