Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0300 ATGAAGCCCATTGAGCCCACTAACTCTGGCAATCATTGCCGCCAAACGGGACATTTCAAAAGCTGTAAATGCCGTGGAGACTACTCCATGGATGGGAAGGCTAACCTTCCGGTCTCACCTCCGACCGCCAAGAACTTGTTCCGCCCAATCAATCCAGAGACTACATCGTCTTCGTCATCCTCCCTATCTTCTTCCTCACCGCCGGACTTCCTCCGGCATGTTCAAGCCGCCTTCAAGCGTCATCGTCCTATCGGTACAGTGCAATCAAATATAAGACCAAGGCGCATGATGGTTCCTCAACGTGAGGTGTCAAGAAATTCTACAGCGAAAGTCGGTCCAAATGTAGATGATAAGAAGTCGCAGGAGATATCTTCAAGTAAGGTTCAGTCGGAGATGGAGTCATATGCACATAGAAATAGCACGAATTCTATGATTGGGGAAGGTCAAGAGAACGTATTAATCACGCCTCCTTCTGTTTCTGGCAGTTGCTACAATGCGCTTGACAAAGGATGCAATCCATGCAATGCACAAGAATATCATTTAAATGTAATCACTAATTGTAAAGATAAGGTTGTCATGCATTCTTTGCCTGTGGAGTCTCAAAATGTAGACGGTCAGAAGAAAGTCCAGTTCTCAGTAGGAAACAACACTACTGCCCAGGGGGCCGATGATGGAAAGGCCACTGAGTTGGAGAACTTATCATCTCATGTGGGTTCACTTGTATTGACAGAAATGGAATGTGCTGCAAGCACCCAGCCGGAAGAATTTAATTTATTCAATCAAGATCGAAAGCACCAAAGTGTTTTGCAGGCAGAGTCTGAACTAACTTTGAGATCCGATGGAGGATTAAATTCCCAGTTGGCTAAAAGAACAACAGCTATTCAGGATCATCTGCAGCAATTCAGAAACTTTTTAAGTCAGCCAGCTACTCAATCTTCAGTAGTGGGACCTTCATGTGCTACCACAACATCTGTCCATTCATCTTCAGCTCCTATGCTAAATTCAACAACCCATCATTCTCATTCATATGTTGATAGTGGTTCACATGAGGCAGCAGAACCTTTGGGGGAAAATAATGTTAATAGTCATCTGATAACTCAAGGAGTTGTGAAATCATCTAGCACTTGCCTAAAAGAGACCAATAAAATGTCAGTGGATCAAGCAGCAGCTGCATCTAGTTCTGCCATTAATACAGGGTTACCTTCTAAGGATGGTAACCTATGTAAGGAGCAGCAAGGCAGCATGCTAAAGGAAAGTAACATTTCTAAAACTACCTGTGATGATAAGCCGTATAAGGGTAAAGAATCTTCAGGTGTTACCAACATACAACCTCAGGCTCCAATGTCTAGAACTTCATTTTCAGATGTTAGGTTGGACTCGTCTAAGTCAGAAAAACAAGAGAAGGCAGTAAGTAGTAAAGGCACATCAACTACTCGGAAAAGGGCCTATGACCCTGATATGTTTTTCAAAGTAAATGGCAAGCTGTATCAAAGGCTTGGCAAGATAGGTAGTGGAGGAAGTAGTGAAGTACACAAAGTAATATCATCAGACTGTACAATCTATGCGCTTAAAAAGATCAAGCTAAAGGGCCGTGATTATGCCACTGCATATGGGTTCTGCCAAGAGATTGAGTATCTAAATAGGCTGAAGGGAAAGAATAATATTATACAGCTGATTGACTATGAGGTGACTGACAAGACTTTGCTTGATGAAGTACTGAGAGGCTCCTTGAGTAGTAAAGAGAGCCGAGTCAAGGATGATGGATATATATACATGGTTCTTGAATATGGGGAAATTGATTTGGCTCATATGCTGTCTCAGAAGTGGAAGGAACTGGATGGACACAACCAGACCATAGATGAGAATTGGCTTCGATTTTATTGGCAGCAAATACTTCAAGCTGTCAATACAATACACGAGGAACGTATAGTGCATTCTGACCTGAAGCCAGCCAATTTTCTTCTTGTCAAAGGTTCCTTAAAACTGATTGATTTTGGCATAGCCAAAGCAATAATGAGCGATACAACAAATATCCAACGGGATTCACAGGTGGGTACTCTGAGTTACATGTCTCCAGAGGCATTTATGTGCAATGAGAGTGATGCAAATGGAAATATCATAAAGTGTGGCCGACCATCGGACATTTGGTCTCTGGGCTGCATTCTCTATCAAATGGTATATGGCAGGACGCCATTTTCAGAGTACAAAACGTTCTGGGCCAAATTCAAAGTCATAACAGATCCTAATCATGAAATTACGTATGAACCCGTTTCAAACCCCTGGCTCCTGGATCTCATGAAGAGGTGTCTAGCATGGGACCGTAATGAAAGATGGAGAATTCCTCAGCTTCTCCAACATCCGTTTCTTGTTCCGCCAACTCCGCCACAGCCTTCCCGTTCCCAAGATCAAAGCTTTAAATTGCTACAATTTATAGCTGAAACTTGGATAGATGACCCAGAAGCTTCAAAGCTCTGTTGTCAGCTCCAGCAGTTGGTTGGCGATCCACTCAAGTTAATAACTCCTCACTCTCTTAGCTCACGAGATCAACAATGTAAACTATTGTTGCAATTGTCTGAACTTTGCCTCCAGCTGCATAAGCGAGTAAAAAGTTCGGATAGAGAACCAAAGATAGATTCATGA 2640 0.4273 MKPIEPTNSGNHCRQTGHFKSCKCRGDYSMDGKANLPVSPPTAKNLFRPINPETTSSSSSSLSSSSPPDFLRHVQAAFKRHRPIGTVQSNIRPRRMMVPQREVSRNSTAKVGPNVDDKKSQEISSSKVQSEMESYAHRNSTNSMIGEGQENVLITPPSVSGSCYNALDKGCNPCNAQEYHLNVITNCKDKVVMHSLPVESQNVDGQKKVQFSVGNNTTAQGADDGKATELENLSSHVGSLVLTEMECAASTQPEEFNLFNQDRKHQSVLQAESELTLRSDGGLNSQLAKRTTAIQDHLQQFRNFLSQPATQSSVVGPSCATTTSVHSSSAPMLNSTTHHSHSYVDSGSHEAAEPLGENNVNSHLITQGVVKSSSTCLKETNKMSVDQAAAASSSAINTGLPSKDGNLCKEQQGSMLKESNISKTTCDDKPYKGKESSGVTNIQPQAPMSRTSFSDVRLDSSKSEKQEKAVSSKGTSTTRKRAYDPDMFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKNNIIQLIDYEVTDKTLLDEVLRGSLSSKESRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGHNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLAWDRNERWRIPQLLQHPFLVPPTPPQPSRSQDQSFKLLQFIAETWIDDPEASKLCCQLQQLVGDPLKLITPHSLSSRDQQCKLLLQLSELCLQLHKRVKSSDREPKIDS 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0300 879 MobiDBLite consensus disorder prediction 99 129 - -
Lele25g0300 879 CDD PKc_Mps1 494 789 - -
Lele25g0300 879 SUPERFAMILY Protein kinase-like (PK-like) 491 801 IPR011009 -
Lele25g0300 879 Pfam Protein kinase domain 496 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0300 879 MobiDBLite consensus disorder prediction 48 68 - -
Lele25g0300 879 MobiDBLite consensus disorder prediction 436 456 - -
Lele25g0300 879 MobiDBLite consensus disorder prediction 35 68 - -
Lele25g0300 879 Gene3D Phosphorylase Kinase; domain 1 489 573 - -
Lele25g0300 879 Gene3D Transferase(Phosphotransferase) domain 1 610 792 - -
Lele25g0300 879 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Lele25g0300 879 PANTHER MIXED LINEAGE PROTEIN KINASE 53 807 - -
Lele25g0300 879 MobiDBLite consensus disorder prediction 311 342 - -
Lele25g0300 879 MobiDBLite consensus disorder prediction 413 479 - -
Lele25g0300 879 FunFam serine/threonine-protein kinase mph1 isoform X2 489 576 - -
Lele25g0300 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Lele25g0300 879 ProSiteProfiles Protein kinase domain profile. 496 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0300 879 MobiDBLite consensus disorder prediction 311 355 - -
Lele25g0300 879 SMART serkin_6 496 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0300 879 FunFam serine/threonine-protein kinase mph1 isoform X1 610 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0300 Lele-ChrLele25 1790697 1796058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0300 502 790 MAP Kinase Kinase Kinase AT4G08470 28.669 2.52e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Lele25g0300 Pkinase 5.4e-56 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0300 25 1790697 1796058 Lele27g1786 27 22947230 22952329 hybridization
Lele25g0300 25 1790697 1796058 Lele28g0314 28 1862685 1867407 hybridization