Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0289 ATGGCCATGCCGATGCCTATTGACATGTATGCCATCCCTGAGCTCGACTTTTCCGACTACACCGCCCCTTCTTCTTCCGATGAGGATTGTAATTATTACTGGAACCACTGGTCACCCGTCGTCAACTGGGACGCCTTCACATGTGGCCCCGGCCATGAAGGCTTCCATGACCTCATGGAAACCATGCTGGACGACGTGGCCGGGGGAATGAGCCCCGCCACGGATCCCAGCAGTGTGGAAGAGGAAGGGTGTAGCAACTCTACTTCCACGACCGACGTAACCATGGCCGATGATGAAGTGAACGGCGGTTTGGAGGATTTCAAGGGCCTCAGACTGGTGCACCTCCTGATGGCGGCTGCCGAGGCTCTCACCGGAGTCAACAATAGCCGTGATCTGGTTATGGTGATATTGGTTCGGCTCAAGCAGTTGGTGTCGCCGACCCACGGAACCAACATGGAGCGGCTAGCGGCGTATTTTACGGACGCCCTGAGGGGCTTAGTAGAGGGAGCGCATGGTACTAGGCATTTGAATGGGATCGCCAACAGTGGCGACGAGAATCGTCATCAGACCGACATGCTGGCCGCCTTCCAGCTCCTTCAGGACATGTCACCGCACGTCAAGTTCGCCCACTTCACGGCCAACCAGGCCATCCTGGAGGCGGTGGCCCAGGACAGGCGGATCCACATCGTCGACTATGACATCATGGAAGGGACGCAATGGGCCTCCCTGATGCAGTCACTAGCCTCCCGCAAGGATGGTCCACACATCAGGATCACGGCCATCTCGAGGACGGGAAGTGCTAGGAGATCAATCGCCACCGTCCAAGAGACAGGTCGTCGTTTGACTGCCTTCGCCGCTTCCATTGGCCAACCCTTCTCGTTTCACCAATGCAGGCTCGACTCAGACGAAACCTTCCGACCCTCCGCCGTGAAACTGGTTCGAGGGGAGGCGGTGGTGTTCAACTGCATGCTCCACCTGCCCCACCAGAGCTACAGGTCGCCCGAATCCATCGAGTCGTTTCTGAGGGGAGCAGCGGCGTTGAAGGCTAGAATGGTGACGTTGGTGGAAGAGGAGGGAGGGCCGACGGGGAAAGAAGTGGGGTTTATGGGGAGGTTCATGGACAGGCTGCACCATTATTCGGCGGTGTACGATTCGCTGGAGGCGGGGTTTCCGATGCAGGTTCGGGCTAGGGCATTGGTGGAGCGGGTGTTCTTGGGGCCCCGAATAGCGGCGTCGCTGGCCCGCATATACAGAATGGGGGAATTGGAGGGGGGAGAGAGGGGGTCGTGGGGAGAGTGGTTGGGTGAGGAAGGGTTCAAGGGAAAGGACATAAGCTTCGCGAATCACTGTCAGGCGAAGCTGTTACTGGGTTTATTTAACGACGGATATGGAGTGGAGGAGGTGGGCAGTAAAAATAAGTTGGTTTTGAGCTGGAAATCAAGGCGCTTGCTTTCAGCTTCTGTTTGGACGCCATTTAGGAGAATCGCTTCCTCCTCCTCCACCACGACGTGGAATTTCCCATCTTTTCTTTCTGCCATGTCCCTCGACAAAGAGCTCGTTCCCAATCACAATGACACCTTTCAGAAGAGCCAGCAACCTTTGCAGGTTGCAAAGCGCTTAGAGAAGTTCAGAACAACAATCTTCACCCAAATGAATAGATTTAAGAAAGATACTGGGCTTAAAGTGGACCCTGAAAAGGAAGTTACTGTTACAAGTGGATGCAACGAAGCAATTGCCGCCACTATGTTGGGATTAATAAATCCTGGTGATGAGGTTGTTCTATTTGCTCCTTTTTATGATTCCTATGAGGCCACTCATTCCATGGCCGGTGCTAAAATAAAATGCATCACTTTGCGCCCTCCAGACTTTGTTGTCCCCATCGAAGAACTGAGTGAGAATGATGTTCTGGCTTTTTCTGATGAAGTTTATTCTAAGTTGTCTTTCGATGTGGATCGCATTTCTATAGCTTCTCTTCCTGGAATGTTCGAAAGGACTTGGGCAACTGCAGCAGCTCTTAGAGCACCAGATTCTTATTTTGTGTATCTCAAGAGGGATTATATGGAAAAGAGGGAGATTTTGGTGGATGGACTGAAGGCTGTTGGTTGTAAGGTGTTCCCGTCCAGTGGAACTTACTTTGTTGTAGTGGATCACACACCTTTTGGGCTGGAAAATGACGTTGAATTCTGTGAATATCTAATTAAGGAGGCGGGAGTGGTTTATGTTTTCTTCCTGTTGATGATTGCCTCGGAGCTCTTAAACCCGGCATTTTCTTTGTCCGGGAGGCGTGTTATATGGCAGAATGTTGTTCTCTTGGCCATTGTGCTTCATGAAACTCAACAGCAATCACGAGGGGTTCATGGCGATCATGAAGTAAAGAGAATGCGCAGTTTAGGTGATAGAAAGTTCAATTGCAGTCCAACTTGTGACAGTCACTACTTGCCGAGCCCCGCCTGA 2454 0.5216 MAMPMPIDMYAIPELDFSDYTAPSSSDEDCNYYWNHWSPVVNWDAFTCGPGHEGFHDLMETMLDDVAGGMSPATDPSSVEEEGCSNSTSTTDVTMADDEVNGGLEDFKGLRLVHLLMAAAEALTGVNNSRDLVMVILVRLKQLVSPTHGTNMERLAAYFTDALRGLVEGAHGTRHLNGIANSGDENRHQTDMLAAFQLLQDMSPHVKFAHFTANQAILEAVAQDRRIHIVDYDIMEGTQWASLMQSLASRKDGPHIRITAISRTGSARRSIATVQETGRRLTAFAASIGQPFSFHQCRLDSDETFRPSAVKLVRGEAVVFNCMLHLPHQSYRSPESIESFLRGAAALKARMVTLVEEEGGPTGKEVGFMGRFMDRLHHYSAVYDSLEAGFPMQVRARALVERVFLGPRIAASLARIYRMGELEGGERGSWGEWLGEEGFKGKDISFANHCQAKLLLGLFNDGYGVEEVGSKNKLVLSWKSRRLLSASVWTPFRRIASSSSTTTWNFPSFLSAMSLDKELVPNHNDTFQKSQQPLQVAKRLEKFRTTIFTQMNRFKKDTGLKVDPEKEVTVTSGCNEAIAATMLGLINPGDEVVLFAPFYDSYEATHSMAGAKIKCITLRPPDFVVPIEELSENDVLAFSDEVYSKLSFDVDRISIASLPGMFERTWATAAALRAPDSYFVYLKRDYMEKREILVDGLKAVGCKVFPSSGTYFVVVDHTPFGLENDVEFCEYLIKEAGVVYVFFLLMIASELLNPAFSLSGRRVIWQNVVLLAIVLHETQQQSRGVHGDHEVKRMRSLGDRKFNCSPTCDSHYLPSPA 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0289 817 Pfam Aminotransferase class I and II 543 622 IPR004839 GO:0009058|GO:0030170
Lele25g0289 817 Pfam Aminotransferase class I and II 667 740 IPR004839 GO:0009058|GO:0030170
Lele25g0289 817 Gene3D Aspartate Aminotransferase, domain 1 663 742 IPR015422 GO:0003824
Lele25g0289 817 ProSiteProfiles GRAS family profile. 103 490 IPR005202 -
Lele25g0289 817 MobiDBLite consensus disorder prediction 70 94 - -
Lele25g0289 817 SUPERFAMILY PLP-dependent transferases 552 741 IPR015424 -
Lele25g0289 817 CDD AAT_like 552 741 - -
Lele25g0289 817 Pfam GRAS domain family 112 490 IPR005202 -
Lele25g0289 817 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 91 486 IPR005202 -
Lele25g0289 817 Gene3D - 552 632 IPR015421 GO:0003824
Lele25g0289 817 MobiDBLite consensus disorder prediction 78 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0289 Lele-ChrLele25 1731516 1740842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0289 98 491 GRAS Transcription Factor Family AT3G54220 35.750 1.07e-50 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele25g0289 GRAS 2.2e-93 CL0063