Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0285 ATGAGGAGCTGGGGATCATGGGTTTCGGAGATTAGAGCTCCTAACCAGAAGACAAGAATATGGCTGGGCTCTTATTCAACTCCTGAGGCAGCGGCCAGAGCCTATGATGCTGCACTTCTGTGCCTGAGAGGCTCCTCTGCAAATCTCAATTTCCCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCCTCTCACTTCAATATTCCTCAGGACACTCTCCTGTCACCAAAGTCAATCCAAAGAGTAGCTGCAGCTGCTGCTAATTCTTCTGTTGATAATGCTACCACCCCACCTTCCTCATCAGTCTCATCTTCATCAATGGTTTCCTCTCCTTCTGATCTAGTTGATGATGAGGCTTCCTTAATCTCATCCTTTGACGCATTCTCTGGCTATGATCACCCAGATGAATCAATGGCTGCTATGGAAACTTTGTACGGCCTTGAAGGGCTACCATCTCCTAAATATGTTGATCAAATCCTCACGGGTTCTTCTTTTGATGACTTTTATTCACGCCAGCTGCTCGATGATCTCTACGAAGAAAGCAACATCAGCTTGTGGAGCTTCTACTGA 570 0.4649 MRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLRGSSANLNFPSSSSSSSSSSSSHFNIPQDTLLSPKSIQRVAAAAANSSVDNATTPPSSSVSSSSMVSSPSDLVDDEASLISSFDAFSGYDHPDESMAAMETLYGLEGLPSPKYVDQILTGSSFDDFYSRQLLDDLYEESNISLWSFY 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0285 189 Pfam AP2 domain 2 44 IPR001471 GO:0003700|GO:0006355
Lele25g0285 189 CDD AP2 1 52 IPR001471 GO:0003700|GO:0006355
Lele25g0285 189 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
Lele25g0285 189 SUPERFAMILY DNA-binding domain 2 53 IPR016177 GO:0003677
Lele25g0285 189 FunFam ethylene-responsive transcription factor ERF014-like 1 54 - -
Lele25g0285 189 SMART rav1_2 1 58 IPR001471 GO:0003700|GO:0006355
Lele25g0285 189 Gene3D AP2/ERF domain 1 53 IPR036955 GO:0003700|GO:0006355
Lele25g0285 189 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 124 - -
Lele25g0285 189 MobiDBLite consensus disorder prediction 87 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0285 Lele-ChrLele25 1713020 1713589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0285 1 188 AP2-EREBP Transcription Factor Family AT1G21910 48.223 9.30e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele25g0285 AP2 2.9e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0285 25 1713020 1713589 Lele27g1802 27 23027484 23028044 hybridization