Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0259 ATGGAGAATTCCTTGGCGTTGACAGTGAAGATGGAGGTGAAATCGGATGTTGAGGATAGTATTAAGCTGCAGGAGGAAGAAGATCTGCATAATTTCCATGTCTTAGCAGTCGACGATAGTCTTATCGATCGGAAACTTCTCGAGAAGCTCCTGCAGGTCTCTTCTTGCAAAGTGACGAGTGTGGACTCCGGCGACAAGGCTCTGAAATATCTTGGTCTTGTTGATGATCTTGATAATGTTTCTTCAACTTCAGAATCATCGACTTCTTCTCCCCAGTCACCCCAACAACAAGAGGCAATGAAAGTGAATTTGATCATGACGGACTACTGCATGCCAGGGATGAGTGGCTATGATTTACTTAAACGAGTCAAGGGATCTTCTTGGAAACACGTTCCAGTGGTGATCATGTCATCAGAGAATGTGCCATCAAGAATCAGCATGTGCTTGGAAGGAGGAGCAGAGGAGTTTCTACTGAAGCCACTGAATTTATCAGACCTGAAGAAGCTTCAGCCGTACCTTGGGAAAACCGTGGATAAGAATAATAGTAACGATAATTCATCAAGAGAACAACAATCTGGTAACAGTGATGTAGCAACCGACAGTGACTGCAATTCCAGTGGTAAGAACAATTGTTTCGCCAAAAGGAAGGCTATGTCTCCTCAACCTTCTGACAGATCCAGACCCAAATTCAAAGGCTTGACGGTCGTGTAA 711 0.4416 MENSLALTVKMEVKSDVEDSIKLQEEEDLHNFHVLAVDDSLIDRKLLEKLLQVSSCKVTSVDSGDKALKYLGLVDDLDNVSSTSESSTSSPQSPQQQEAMKVNLIMTDYCMPGMSGYDLLKRVKGSSWKHVPVVIMSSENVPSRISMCLEGGAEEFLLKPLNLSDLKKLQPYLGKTVDKNNSNDNSSREQQSGNSDVATDSDCNSSGKNNCFAKRKAMSPQPSDRSRPKFKGLTVV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0259 236 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 204 IPR045279 GO:0009736
Lele25g0259 236 CDD REC_typeA_ARR 34 169 - -
Lele25g0259 236 Pfam Response regulator receiver domain 34 168 IPR001789 GO:0000160
Lele25g0259 236 ProSiteProfiles Response regulatory domain profile. 33 174 IPR001789 GO:0000160
Lele25g0259 236 Gene3D - 33 209 - -
Lele25g0259 236 MobiDBLite consensus disorder prediction 175 212 - -
Lele25g0259 236 SUPERFAMILY CheY-like 30 168 IPR011006 -
Lele25g0259 236 MobiDBLite consensus disorder prediction 175 236 - -
Lele25g0259 236 SMART REC_2 32 170 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0259 Lele-ChrLele25 1534257 1536276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0259 32 234 Response Regulator Gene Family AT2G41310 50.673 1.33e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele25g0259 Response_reg 2.5e-17 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0259 25 1534257 1536276 Lele27g1829 27 23185834 23190297 hybridization
Lele25g0259 25 1534257 1536276 Lele28g0278 28 1657030 1661049 hybridization