Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0253 ATGTCAAAGTCTACATCTCTGGAACCGCCATTGTCCATTTATTCTTCACCTGGGACTAGGAAAACTAAACTGGCCGAAGAAATGGATGATCCAGAATCTACAATGACTACAGTTGCTAATTTTGTTGAGCAACTGCATGCCAACTTGTCTTCACCACTTGAGAAGGAATTTATCACAGCACGTTTGCTAGGCATTGCCAGGGCAAGAAAGGATGCTAGAACACTTATTGGCTCTCATGCCCAAGCAATGCCATTGTTCATAAGCATTCTCAGAAACGGAACCCCTCTGGCAAAAGTTAATGTTGCTGCAACTTTGAGTGTCCTGTGCAAAGACGAGGATTTGAGGTTAAAAGTACTTCTTGGTGGTTGTATCCCTCCTTTACTGTCACTTTTGAAGTCTGAAACCACAGAGGCAAGGAAGGCCGCAGCTGAAGCAATATATGAAGTTTCCTCTGGTGGTCTTTCAGATGATCATGTTGGCATGAAAATTTTTGTCACAGAGGGTGTAGTTCCAACTTTATGGGATCATCTAAATCCCAAAAACAAACAAAACAAAGTTGTGGAGGGTTTCATTACCGGGGCATTGAGAAATCTGTGTGGTGACAGAGACAGATACTGGAAAGCAACATTGGAAGCAGGGAGCGTGGATATTATTGTGGGTCTCTTGTCTTCAAAAAATGCTGTTGCTCAGTCAAATGCAGCTTCTCTGCTAGCACGACTGGTGCTGGCTTTCAGTGATAGCATCCCCAAAGTAATAGAATCTGGTGCAGTTAATGCTTTACTTTGCCTTGTTTGTCTGGAAAATGATAGCTCTGTCCGAGCAAGTGCTGCTGATGCTCTAGAGGCCCTTTCATCGAAGTCAACTAAAGCAAAGAAAGCCATTGTCAGTGCAGATGGTGTTCCAATTCTTATTGGGGCTATAGTTGCTCCCTCTAAAGAGTGTATGCAAGAAAACGGTCAGGATCTGCAGCAGCATGCAACTCACGCTTTGGCAAATATTTGTGGTGGCATGTCTTCTTTAATACTATATCTCGGAGAACTCTCCCATTCTCCTCTCCTAGCTGCACCGGTTGGTGATATAATTGGAGCTCTTGCTTACACACTGATGGTGTTTGAGGACAAACATGATGTTGATGGGGAGCCTTTTGATGCAACTCAAATAGAGGATATTCTAGTGACACTATTAAAGCCTCGAGATAACAAGCAGATTCAAGAGAGAGTACTAGAGGCCATGGCTAGTCTATATGGAAACAGCTATCTCTCGAAATGGGTTGAGCATGCAGATTCAAAAAAGTTTCTTATTGGACTCATTACTATGGCTGCTGCTGATGTGCAGGACTACCTTATACTCTCCTTGACAAGCTTCTGCTATGATAGGGTAGGAATATGGGAGGCCATAAACAAAAGAGAAGGCATCCAGTTACTCATCTCAATGCTGGGACTATCCAGTGAGCAGCACCAAGAGTATGCAGTTCAGTTGCTATCAATTTTAATTGATCAGATTGATGACAGCAAATGGGCAATCACTGCTGCTGGAGGAATTCCTCAATTGGTTCAGTTATTAGAGACAGGATCGCAGAAGGCTAGAGAGGAAGCTGCTCATATTCTGTGGAACCTGTGCTGTCACAGTGAAGATATTCGTGCATGTGTTGAAAGTGCAGGGGCCATACCAGCATTCTTATGGCTTTTAAAGATTGGTGGACCAAGAGGACAAGAAGCTTCCGCCATGGCACTCATTAAGCTTGTGCGTAGAGCTGATTCTGCTACCATTAATCAATTGTTGGCATTGCTTCTTGGGGAAACTCCAGGCTCAAAGGTCCATATAATTCGAGTCTTAGGTCATGTACTTACTAAGGCTTCACAGATGGACCTCCTGCAGAAGGGTTCTGCAGCTAATAAGGGGTTGAGATCTCTAGTTCAGGTTCTCAACTTATCAGATGAAGAAACCCAGGAACATGCGGCTTCTGTCCTAGCTGATTTGTTCAGTGCCAGACAAGACATCTGTGATAGCCTCCTTGCTACTGATGAAATTGTGCTTCCTTGCATGAAGCTTTTGACCAGCGAAAATCAAGTTGTTGCAACTCAGTCAGCTCGAGCAATGGGTGCTCTTTCTCGTCCACTACACAGCAGATCTGCCAATAAGATGCCTTATATTGGAGAGGAGGATGTCAAGCCACTAATTAAATTGGCCAAAACTTCCTCCATTGATGCCGCTGAAACTGCAGTTGCTGCGCTGGCCAATCTTCTCTTTGATACCTCTATTGCTGCTGAAGCTTTGGCAGGAGATCTTATTTCATCTTTAACAAGAGTTCTGGCAGAAGGAACTCTGCAAGGTAAACAAAATGCGTCACGTGCACTTCATCAGCTACTGAAGCATTTTCCTGTTGGTGATGTTCTCAAGGGAGATGCTCAGTACCGTGTCACTGTTCTTGCACTTGTTGGTTCCTTGAGTGCTATGAATATGGATGAAACTGATGCTGCCGATGCTTTAGAAGTAGTGGCACTGCTTGCCCAGACAAAACAGGGCGACAGTTTCACTTACAGTCCATGGTCTGCATTTGCAGAATCCCCATCCAATTTAGAACCTCTTATACACTTCCTGGCTGAGGGGCCTCCCCAAGTGCAGGATAAGGCAATTGAAATTCTGTCTAGACTTTGTGGTGATCAATTAGTTGTTCTTGGGGATTTGTTGGCTGGCATGTCTAGATCCATTAGTTCATTAGCTGATAGAATGATGAACTCCTCCAGTTTAGAAGTCAAAGTTGGAGGGGCTTCCTTACTTTTTTGTGCTGCAAAGGAGCATAAAGAGCTGTCAATGGATGTACTTGGCACTTCTGGGGATCTAAAACCATTAATATATGCTTTAGTAGATATGCTGAAGCAGAACTCTAACTGTTCATTAGAGGTTGAAGGAGAAACTTCCAGAAATTTTATGGTGAAGAGTGCATTTCAGGAAGTTGATCTTGATATTCTTGATCTGGCCAAAGTCTCGGGTGTTACTGTTGCCTTGTGGTTACTCTCGATTATTGCTTCTTCCGATATGAAGAACAAATTCACAATTATGGAAGCTGGCGGACTTGAGTCTCTCTCTGAAAAGCTTGCGAACCATACTTCCAATCCACAGGCAGAATTTGAGGATACAGAAGGAATATGGATAAGTGCCTTGTTCCTGGCCATTTTGTTTCAAAACAGAATTGTTGTTCTATCTCCAGTAATAATGCACATTTTACCTTCTCTCACTCATTTACTCCGGTCCGAAGAAGTGGCATATAAATATTTTTCTGCCCAGGCTATGGCTAGTCTTGTTTGTAATGGTGATAAGGGAATAGCTCTTGCTATCGCAAACTCTGGTGCTGTTGCTGGATTGATTTCTATGATTGGCTATATAGAGTCAGATATACCAAACATTGTTGCTTTATCAGATGAGTTTTCACTGGTGCAAAATCCTGACCAAGTAGTTTTGAATCACCTTTTTGAAATTGAAGATATAAGATTGGGATCTACTGCACGGAAATCTATACCTCTCTTGGTGGATCTATTGAGACCAATTCCAGAAAGGCCTTGTGCTCCACCAGTTGCTGTTAAACTGTTGACATGCATTGCAGATGGAAGTGATACAAACAAAATAATCATGGCTGAAGTAGGCGTTTTGGAAGCTTTGACAAAATACCTGTCTTTGAGCCCTCAAGACTCAACTGAGGCCAGTATTTCTGAGTTATTAAGAATACTATTTTGCAATTCTGACCTTATCAAGCATGAAGCGTCAGCAAGTTCTCTGAACCAACTCATTGCTGTTTTGCGTCTTGGATCAAGAAATGCTAGATATAGTGCGGCAAGAGCACTTTGTGAACTTTTTGATGCCGAGAGTATTAGAAACTCAGAATTAGCTAAACAGACCATTCAGCCTTTGGTTGACATGTTTAATACAACATCAGGTAGCGAGCAGGAGGCTGCTCTAATTGCATTAATCAGATTGACGTCTGGAAATTCTTCAAAAGCATCTTTTTTTGCTGATGTAGAAGGGATCCCACTTCAGAGTTTATACCAGATATTGTCTTCCGCTTCATCCCTGGAACTGAAGAGCTATGCTGCGCAACTTTGCTTTGTCCTTTTTGTTAGCAGGATGATTAGAGCTGATCCACTTGCCTCAGAATTCATAGAACCCCTTGTTTCACTGCTGCAGTCTGATTCTGGCCTGGCAGTAGAAGCTGGGATTTTTGCTTTTGAGAGATTACTGGAAGATGAACAACACGTGGAGCTTGCAGTCGCCTACAATGTTGTAAATCTCCTTGTTAGTTTGGTTGGAGGTTCCAACTATCAACTGATTGATGCTACCATATCTGCTCTCATTAAATTGGGCAAAGATAGGACCCCGTGCAAGCTAGACATGGTTAAAGCTGGCATTATTGATAATTGTCTGAAGTTACTTGAATTTGCACCTAGCTCACTGTGTTCCACAATTGCTGAACTATTTCGCATTTTAACAAATAGTAGTGCAATTGCTAGAAGTTCAGAAGCTGCAGAAATTGTAGAACCCCTTTTTAAAGTTTTGCTCCGTTTAGATTTTGACTTGTGGGGACAGCATAGTGCCTTACAAGCTCTTGTAAATATATTGGAGAAGCCACAAAGTCTTGCAACCTTAAAACTAACTCCTAGCCAAGTTATTGAGCCCTTGATCTCATTCCTGGAATCCCCATCCCAAGCCATTCAGCAGCTGGGCACTGAACTGTTGTCTCATCTTCTTGCGCAGGAACATTTTCAGCAAGATATTAAAACAAAGAATGCTGTCGTTCCTCTTGTTCAACTTGCAGGAATTGGAATACTGAACTTACAGCAAACAGCAATAAAAGCATTGGAGAAAATCTCCAAAAGATGGCCAAAAGCAGTTGCTGATGCGGGAGGTATTTTTGAGCTTGCGAAGGTTATTATTCAAGATGATCCTCAGCCACCACATGCACTCTGGGAATCAGCTGCTTTAGTTCTTTCTAATGTACTATGTTCCAATGCTGATTATTATTTTAAAGTTCCCGTGGTAGTTCTTGTAAAACTGTTGCACTCCACGGTTGAGAGTACCATTAGTGTAGCTCTTAAAGGCCTAATGATTCATGAAAGAAGTGATGCTTCAAGCTCTGATCAGATGATAGAAGCTGAAGCTATAGATGTTCTGTTAGACCTTTTAAGATCTCATCAATGTGAAGAAGCATCTGGCGGATTACTTGAAGCTCTATTCAACAATGTGAAAATAAGAGAGATGAAGGCATCTAAGTATGCAATAGCACCGTTATCTCAGTATCTGTTAGATCCGCAGACCAGATCACCGTCTAGCAAGCTTCTTGTTGCTTTAGCATTGGGAAATATTTCCCAGCATGAAGGACATGTTAGAGCTAGTGGTTCTGTTTCTGCTTGTCGTGCATTGGTAAGTTTACTTGAGGATCAGCCAACTGAAGAAATGGTGATGGTTGCTATCTGTGCGTTGCAAAACTTTGTCATGAACAGCAGGACTAATAGGCGAGCTGTTGCAGAAGCTGGTGGCATACTGGTGATTCAGGAATTGCTTCTGTCTACAAATCCAGAAGTTGCAGGACAAGCAGCATTGCTGATCCGATTTTTATTTTCTACTCACACACTACAAGAGTATGTGTCAAATGAGCTGATCAGATCTCTGACAGCTGCACTGGAAAGAGAGTTGTGGTCAACTGCCACAATCAATGAAGAGGTTTTGAAAACTCTGCATGTCATATTCTCGAACTTCCCTAAACTCCACGTGTCTGAAGCAGCAACTCTTTGCATTCCTCATTTGGTAGGGGCACTCAAATCTGGTAGTGAAGGGGCTGAAGACTCTGTACTAGACACTTTGTGCTTGCTAAGACATTCTTGGTCAAGCATGCCAATTGATATATCAAAGTCTCAGGCTATGATTGCTGCTGAAGCCATTCCCATCCTGCAAATGCTCATGAAAACCTGTCCCCCAAATTTCCATGAGAGAGCAGATAGTCTTCTGCATTGCTTACCAGGTTGTTTGACTGTCACCATTAAACGTGGAAACAACCTAAAGCAAGCTATGGGAATTACAAATGCATATTGCCAGTTAACAATAGGCAATGGTCCCCCCAAACTAACCAAGGTTGTGAGTCACAGTATTTCGCCTGAATGGAAAGAAGGATTCACATGGGCATTTGATGTACCTCCAAAGGGCCAGAAGTTGTACATCATATGCAAAAGCAAGAATACTTTTGGCAAGGCAACTCTTGGAAGAGTTACCATACAAATTGATAAAGTGGTAAACGAGGGAGTATACAGTGGAATATTCAGTCTTAATCACGACAGAAACAAAGATGGTTCTTCCCGAACTCTTGAAATTGAGATCATATGGTCCAACAGGATCTCTGATGACGGCCTTTGA 6402 0.4241 MSKSTSLEPPLSIYSSPGTRKTKLAEEMDDPESTMTTVANFVEQLHANLSSPLEKEFITARLLGIARARKDARTLIGSHAQAMPLFISILRNGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSETTEARKAAAEAIYEVSSGGLSDDHVGMKIFVTEGVVPTLWDHLNPKNKQNKVVEGFITGALRNLCGDRDRYWKATLEAGSVDIIVGLLSSKNAVAQSNAASLLARLVLAFSDSIPKVIESGAVNALLCLVCLENDSSVRASAADALEALSSKSTKAKKAIVSADGVPILIGAIVAPSKECMQENGQDLQQHATHALANICGGMSSLILYLGELSHSPLLAAPVGDIIGALAYTLMVFEDKHDVDGEPFDATQIEDILVTLLKPRDNKQIQERVLEAMASLYGNSYLSKWVEHADSKKFLIGLITMAAADVQDYLILSLTSFCYDRVGIWEAINKREGIQLLISMLGLSSEQHQEYAVQLLSILIDQIDDSKWAITAAGGIPQLVQLLETGSQKAREEAAHILWNLCCHSEDIRACVESAGAIPAFLWLLKIGGPRGQEASAMALIKLVRRADSATINQLLALLLGETPGSKVHIIRVLGHVLTKASQMDLLQKGSAANKGLRSLVQVLNLSDEETQEHAASVLADLFSARQDICDSLLATDEIVLPCMKLLTSENQVVATQSARAMGALSRPLHSRSANKMPYIGEEDVKPLIKLAKTSSIDAAETAVAALANLLFDTSIAAEALAGDLISSLTRVLAEGTLQGKQNASRALHQLLKHFPVGDVLKGDAQYRVTVLALVGSLSAMNMDETDAADALEVVALLAQTKQGDSFTYSPWSAFAESPSNLEPLIHFLAEGPPQVQDKAIEILSRLCGDQLVVLGDLLAGMSRSISSLADRMMNSSSLEVKVGGASLLFCAAKEHKELSMDVLGTSGDLKPLIYALVDMLKQNSNCSLEVEGETSRNFMVKSAFQEVDLDILDLAKVSGVTVALWLLSIIASSDMKNKFTIMEAGGLESLSEKLANHTSNPQAEFEDTEGIWISALFLAILFQNRIVVLSPVIMHILPSLTHLLRSEEVAYKYFSAQAMASLVCNGDKGIALAIANSGAVAGLISMIGYIESDIPNIVALSDEFSLVQNPDQVVLNHLFEIEDIRLGSTARKSIPLLVDLLRPIPERPCAPPVAVKLLTCIADGSDTNKIIMAEVGVLEALTKYLSLSPQDSTEASISELLRILFCNSDLIKHEASASSLNQLIAVLRLGSRNARYSAARALCELFDAESIRNSELAKQTIQPLVDMFNTTSGSEQEAALIALIRLTSGNSSKASFFADVEGIPLQSLYQILSSASSLELKSYAAQLCFVLFVSRMIRADPLASEFIEPLVSLLQSDSGLAVEAGIFAFERLLEDEQHVELAVAYNVVNLLVSLVGGSNYQLIDATISALIKLGKDRTPCKLDMVKAGIIDNCLKLLEFAPSSLCSTIAELFRILTNSSAIARSSEAAEIVEPLFKVLLRLDFDLWGQHSALQALVNILEKPQSLATLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEHFQQDIKTKNAVVPLVQLAGIGILNLQQTAIKALEKISKRWPKAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNVLCSNADYYFKVPVVVLVKLLHSTVESTISVALKGLMIHERSDASSSDQMIEAEAIDVLLDLLRSHQCEEASGGLLEALFNNVKIREMKASKYAIAPLSQYLLDPQTRSPSSKLLVALALGNISQHEGHVRASGSVSACRALVSLLEDQPTEEMVMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSTNPEVAGQAALLIRFLFSTHTLQEYVSNELIRSLTAALERELWSTATINEEVLKTLHVIFSNFPKLHVSEAATLCIPHLVGALKSGSEGAEDSVLDTLCLLRHSWSSMPIDISKSQAMIAAEAIPILQMLMKTCPPNFHERADSLLHCLPGCLTVTIKRGNNLKQAMGITNAYCQLTIGNGPPKLTKVVSHSISPEWKEGFTWAFDVPPKGQKLYIICKSKNTFGKATLGRVTIQIDKVVNEGVYSGIFSLNHDRNKDGSSRTLEIEIIWSNRISDDGL 2133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0253 2133 ProSiteProfiles C2 domain profile. 1986 2103 IPR000008 -
Lele25g0253 2133 SMART C2_3c 2006 2102 IPR000008 -
Lele25g0253 2133 CDD C2 2007 2097 - -
Lele25g0253 2133 MobiDBLite consensus disorder prediction 1 19 - -
Lele25g0253 2133 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 512 554 IPR000225 GO:0005515
Lele25g0253 2133 Gene3D - 1152 1344 IPR011989 -
Lele25g0253 2133 Gene3D - 360 627 IPR011989 -
Lele25g0253 2133 SMART arm_5 623 662 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 156 200 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 1583 1623 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 1832 1872 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 1541 1582 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 1744 1788 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 111 151 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 751 791 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 287 335 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 1456 1496 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 1204 1244 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 543 583 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 244 285 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 459 499 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 710 750 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 201 242 IPR000225 GO:0005515
Lele25g0253 2133 SMART arm_5 501 541 IPR000225 GO:0005515
Lele25g0253 2133 Gene3D - 853 1142 IPR011989 -
Lele25g0253 2133 Gene3D - 1345 1604 IPR011989 -
Lele25g0253 2133 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1800 1843 IPR000225 GO:0005515
Lele25g0253 2133 SUPERFAMILY ARM repeat 856 1285 IPR016024 -
Lele25g0253 2133 SUPERFAMILY ARM repeat 443 794 IPR016024 -
Lele25g0253 2133 SUPERFAMILY ARM repeat 72 308 IPR016024 -
Lele25g0253 2133 Pfam Armadillo/beta-catenin-like repeat 505 540 IPR000225 GO:0005515
Lele25g0253 2133 SUPERFAMILY ARM repeat 1586 2003 IPR016024 -
Lele25g0253 2133 Gene3D - 1608 2005 IPR011989 -
Lele25g0253 2133 Gene3D - 36 350 IPR011989 -
Lele25g0253 2133 SUPERFAMILY ARM repeat 1192 1540 IPR016024 -
Lele25g0253 2133 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 18 2127 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Lele25g0253 2133 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2004 2109 IPR035892 -
Lele25g0253 2133 Pfam C2 domain 2006 2105 IPR000008 -
Lele25g0253 2133 Gene3D C2 domain 2006 2130 IPR035892 -
Lele25g0253 2133 Gene3D - 628 844 IPR011989 -
Lele25g0253 2133 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0253 Lele-ChrLele25 1494137 1502610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0253 472 700 U-box Gene Family AT2G23140 29.958 7.16e-11 65.5