Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0250 ATGGCTTCAGCAGATCTACAGCTACCACCGGGCTTCAGATTCCACCCGACGGACGAGGAGCTCGTGATGCACTATCTCTGTCGTAAATGTGCATCGCAGCAGATAGCTGTTCCGATAATTGCGGAAATCGATCTTTACAAGTATGATCCCTGGGACCTTCCGGGCCTGGCTCTGTATGGGGAGAAGGAGTGGTATTTCTTCTCGCCGAGAGACCGCAAATATCCGAACGGTTCGAGGCCGAACCGGGCAGCCGGGACCGGCTACTGGAAGGCGACCGGAGCAGATAAGCCCATCGGTCATCCGAAACCGGTAGGGATCAAGAAAGCTCTGGTATTTTATGCAGGAAAAGCGCCCAAAGGCGAGAAAACAAATTGGATCATGCATGAATACCGTCTCGATGTGGATCGCTCCGCTCGCAAAAAGAATAGCTTAAGGCTCGATGACTGGGTGCTTTGCCGTATCTACAACAAGAAAGGTGCCATCGAGAAGCAACCGAGTCCTCTGACCCGGAAAACTGAGTCATCAGAAATAAGCGAGGACCAGAAGCCACTGCATCTGACCCGTGGCGGCGCACTCCCTCCTCCGCTGCCGCCGGCTCAAGCGCCGTCGGCGATGACCGATTACATGTATTTTGACCCGTCGGATTCAATCCCGAAGCTGCACACGGATTCGAGCTGTTCGGAGCAAGTGGTGTCGCCGGAGTTCGCCAGTGAGGTGCAGAGCGAGCCCAAGTGGAATGAGTGGGAGAAGAACCCTGATTTTCCGTATAATTACGTGGATGCCACTCTGGCCAATAACAGCTTCGTATCGCAGTTTCAGGGCGGCGGGCAGATGTCGCCGTGGCAGGACATGTTCATGTACCCGCCGAAGCCCTTCTAA 879 0.5472 MASADLQLPPGFRFHPTDEELVMHYLCRKCASQQIAVPIIAEIDLYKYDPWDLPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLDVDRSARKKNSLRLDDWVLCRIYNKKGAIEKQPSPLTRKTESSEISEDQKPLHLTRGGALPPPLPPAQAPSAMTDYMYFDPSDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWEKNPDFPYNYVDATLANNSFVSQFQGGGQMSPWQDMFMYPPKPF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0250 292 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
Lele25g0250 292 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Lele25g0250 292 FunFam NAC transcription factor 17 161 - -
Lele25g0250 292 MobiDBLite consensus disorder prediction 163 195 - -
Lele25g0250 292 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Lele25g0250 292 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
Lele25g0250 292 PANTHER NAC TRANSCRIPTION FACTOR 56 8 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0250 Lele-ChrLele25 1485369 1486848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0250 6 292 NAC Transcription Factor Family AT1G01720 71.854 7.25e-145 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele25g0250 NAM 9.7e-39 No_clan