Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0247 ATGGCATCAAGGGTCGATGTAGGTGGCGGCAATCGTATAGCAGCCCTCAATGACACACCATCTATTAATGGCCATAATGGTCACTTGGCCCCAAAGAAACCTGGGTGGAGGAAGTTTCTATCCTTTGTAGGTCCTGGTTTTCTTGTCTCCTTGGCTTACCTTGATCCTGGAAACTTAGAAACTGATCTGCAAGCTGGAGCTAACCACAGATATGAGCTGCTATGGGTGATACTTATTGGGCTATTGTTTGCACTCATTATTCAGTCATTGGCTGCAAACCTTGGAGTCTGCACTGGGAAGCACCTTTCAGAAATATGTAAAGTGGAGTATCCATGGCTAGTGAAGTACTGCTTGTGGTTGCTGGCTGAGATTGCTGTCATAGCCGCGGATATACCCGAAGTTGTTGGCACAGCCTATGCGCTTAACTTACTGTTCCACATCCCACTATGGGCAGGAGTTCTCTTGACCGGCTTCTCCACTCTCTTGCTTCTTTCTCTTCAGAGATTTGGGATGAGCCATGTAAGACCCCCAGCTTCTCAAGTTTTGAAGGGAATGTTTGTCCCTAAACTTGGTGGTGAAGGAGCCGTTGGAGACGCCATTGCCCTTCTCGGAGCCCTTGTCATGCCGCACAACCTCTTTCTCCATTCTGCTCTTGTACTCTCTAGAAAGGTACCCAGCACTAGGCGTGGAATCAATGAGGCGTGCAGATACTTTCTGATAGAGAGCGGGATCGCTCTATTTGTGGCATTTCTGATAAATGTAGCAGTAGTTTCAGTATCAGGCACCGTATGCTCAGCAAGTTATCTTTCAGCTCAGGATCTAGAAAGATGCGACGATCTCTCCCTTGATTCTGCCTCTTTCCTTCTCCAGGGGTTCTTAGATTTAAGGATGAAGAAATGGATAAGAAACTTGGTGACTAGGAGTATTGCCATAACGCCTAGTCTCATCGTCGCCATTATTGGTGGATCTTCTGGAGCTGGCCGTCTTATCATTATTGCTTCGATCGTTGTGATTTCATGGATCCTAGGGTTGGGAATCATAGGTATTAACGTGTACTATCTGAGCACCGGTTTTGTGGGTTGGTTAATTCATAGCAATCTCCCAAAGGTGGCAAACGTTTTCCTTGGAATCATTGTATTTCCTCTTATGGCCATTTACGTTCTTGCCATTATCTACCTAACCATCAGAAAAGACACTGCTCGAACATTTATAGAGATACACAACGACCCCGTAGCGCCAACCCACATGGAAAATGGACAAGGGGATCGTTAA 1272 0.4615 MASRVDVGGGNRIAALNDTPSINGHNGHLAPKKPGWRKFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLLFALIIQSLAANLGVCTGKHLSEICKVEYPWLVKYCLWLLAEIAVIAADIPEVVGTAYALNLLFHIPLWAGVLLTGFSTLLLLSLQRFGMSHVRPPASQVLKGMFVPKLGGEGAVGDAIALLGALVMPHNLFLHSALVLSRKVPSTRRGINEACRYFLIESGIALFVAFLINVAVVSVSGTVCSASYLSAQDLERCDDLSLDSASFLLQGFLDLRMKKWIRNLVTRSIAITPSLIVAIIGGSSGAGRLIIIASIVVISWILGLGIIGINVYYLSTGFVGWLIHSNLPKVANVFLGIIVFPLMAIYVLAIIYLTIRKDTARTFIEIHNDPVAPTHMENGQGDR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0247 423 PRINTS Natural resistance-associated macrophage protein signature 118 144 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0247 423 PRINTS Natural resistance-associated macrophage protein signature 146 165 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0247 423 Pfam Natural resistance-associated macrophage protein 60 172 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0247 423 Pfam Natural resistance-associated macrophage protein 285 342 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0247 423 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 286 341 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0247 Lele-ChrLele25 1466613 1469219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0247 8 414 Inorganic Solute Cotransporters AT1G15960 47.904 2.47e-154 445