Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0246 ATGGAAGATGTAAGCAATCGTATAGCACCAGCACGTAATGTTGATGAAGGCTTCTCCAGTCACAAGAAAGCCGGGTGGAGGGACTTTCTACCCTACGTAGGTCCTGGTTTTCTGGTCTCCATGGCTTACCTTGATCCTGGAAACTTGGAAACTGATATGCAAGCTGGAGCTAACCACAGATATGAGCTGCTATGGGTGATACTTATTGGGCTATTTTTTGCTCTCATTATTCAGTCATTGGCTGCAAATCTGGGCGTAACCACCGGGAAGCACCTTTCAGAATTATGTAAGGTGGAGTACCCATCACTAGTGAAGTACTGCTTATGGTTGCTGGCTGAGATTTCTGTCATAGCTGCAGATATAGCCGAAGTTGTTGGCACAGCCTTTGCGCTCAACATACTCATCCACATCCCACTATGGGCAGGAGTTCTCTTGACTGGCTTCTCCACTCTTTTGCTTCTTGGTCTCCAGCGATTTGGCGTTAGGAAGCTGGAAGTGCTGATATCAGCTCTAGTATTTATAATGGCGGGATGCTTCTTTGTGGAAATGAGCTATGTGAAACCACCAGCTTCTGATGTATTGAAAGGAATGTTTGTCCCCAGACTTGATGGTCATGGAGCCACTGCTGACGCCATTGCCCTTTTTGGAGCCCTCATCATGCCGCACAACCTCTTTCTCCACTCTGCTCTTGTGCTCTCTAGAAAAGTACCCAGCTCTGTCCGTGGCATCAATGATGCATGCAGATACTTTCTAATAGAAAGTGGGTTTGCTCTGTTTGTAGCATTTCTAATAAACGTAGCAGTGGTTTCAGTATCAGGCACAGTATGCTCAGCAAATAATCTTTCAGCTCAAGATACAGAAAGATGCGAGGATCTCTCCCTTGATTCTGCCTCCTTTCTTCTCAAGAATGTGTTAGGAAGGTCCAGTTCAACAGTTTATGCCATAGCACTTCTGGCCTCTGGACAAAGCTCCACGATCACTGGCACCTATGCAGGGCAGTACATCATGCAGGGATTCTTGGATTTGAGGATGAAAAAATGGATGCGAAATTTGATGACTAGGTGTGTTGCCATAGTACCTAGCCTTGCTGTTGCTGTTATTAGCGGATCTTCGGGTGCAAGCCGCCTTATTATCATTGCCTCGATGATACTTTCGTTTGAGCTTCCATTTGCTTTGATTCCACTCCTCAAGTTCAGCAGCAGCAGCCCCAAGATGGGACCTCACAAGAATTCTACAATTATCATTGTGATTTCATGGATCCTAGGCTTGGGAATCATCGGCATCAATGTGTACTACCTAAGCACCCGTTTTGTCGGTTGGTTAATTCATAGCAGTCTCCCAAAAGTGGCAAACATCTTCATTGGGATCATAGTATTCCCTCTCATGGCCATTTATGTTGTTTCTGTTATATACCTCACCTTCAGAAAAGACACTGTCAAGACATTCATAGAGACTCAGAACGACTCTGGGGTACCAACCCACATGGAAAAAGGTCTCGTTAATGCTAATGAGCAATTGGAACTGAGTCCAATTTCTTTTAGACAAGATTTAAGGGATATCCAACTTCCAGATTAA 1575 0.4483 MEDVSNRIAPARNVDEGFSSHKKAGWRDFLPYVGPGFLVSMAYLDPGNLETDMQAGANHRYELLWVILIGLFFALIIQSLAANLGVTTGKHLSELCKVEYPSLVKYCLWLLAEISVIAADIAEVVGTAFALNILIHIPLWAGVLLTGFSTLLLLGLQRFGVRKLEVLISALVFIMAGCFFVEMSYVKPPASDVLKGMFVPRLDGHGATADAIALFGALIMPHNLFLHSALVLSRKVPSSVRGINDACRYFLIESGFALFVAFLINVAVVSVSGTVCSANNLSAQDTERCEDLSLDSASFLLKNVLGRSSSTVYAIALLASGQSSTITGTYAGQYIMQGFLDLRMKKWMRNLMTRCVAIVPSLAVAVISGSSGASRLIIIASMILSFELPFALIPLLKFSSSSPKMGPHKNSTIIIVISWILGLGIIGINVYYLSTRFVGWLIHSSLPKVANIFIGIIVFPLMAIYVVSVIYLTFRKDTVKTFIETQNDSGVPTHMEKGLVNANEQLELSPISFRQDLRDIQLPD 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0246 524 PRINTS Natural resistance-associated macrophage protein signature 211 234 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0246 524 PRINTS Natural resistance-associated macrophage protein signature 161 182 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0246 524 PRINTS Natural resistance-associated macrophage protein signature 108 134 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0246 524 PRINTS Natural resistance-associated macrophage protein signature 321 340 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0246 524 PRINTS Natural resistance-associated macrophage protein signature 381 400 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0246 524 PRINTS Natural resistance-associated macrophage protein signature 136 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0246 524 PRINTS Natural resistance-associated macrophage protein signature 349 366 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0246 524 Pfam Natural resistance-associated macrophage protein 50 411 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0246 524 Hamap Divalent metal cation transporter MntH [mntH]. 11 437 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0246 524 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 21 481 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele25g0246 524 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 27 403 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0246 Lele-ChrLele25 1462689 1465428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0246 22 523 Inorganic Solute Cotransporters AT1G80830 59.960 0.0 618