Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0240 ATGTCTCTGCACGTGCCACGTGGCATTCTCTGTCGACATGAGTCTGCCCATCTCTCCGGTATCCGGGTACTGTCACCTTCCCATCTCTGTTTCTTTCCCCCTTCCTTGTCCACAGGCAATGGCAGAGTCTTCGGTTATGGGTTGGGGCTCGGGTTCGAGTGGCAGAGGAAAAAGGGAAGGCTAAGGCGAAGGCTCAAGTTCGTTGTTAACGCAGAGCTTTCGAAGTCGTTTTCCTTGAATTTCGGGTTGGACTCTCAGAATGCGAATTCCTTCCAATCCCATGACCCATCACAGCTGCCTTGGATTGGTCCAATTCCAGATGATATTGCTGAAATTGAGGCATATCGTAGGATCTTTAGGAGCTCTGAAAGGCTTTACTCTGCATTAGTGGATGCTTTGTGCAATCCATTTACCGGTGAATGCAGTGTCTCATATGACGTCCCATCAGATGAGAACCCACAACTTGAAGATAAAACAGTCTCTGTCCCGGGATGTATGGTATCTCTTATGAATAAAGGTAGGGAGGGTATTCTTTCTGGAAGATCCTCAGTCATGAATTCCTTTCGCACTGTACATGTTAGCACAATGGGGGATAATCTCCCCCCACTTGCCATATTTAGGAGTGAGATGAAAAGGTGTGGTGAGAGCTTGCATGTAGCTCTTGAGAACTATTTGATATCTGATGATGATCAAAGCATAAATGTGTGGAGAAAACTTCAGAGACTGAAAAATGTCTGCTATGATTCAGGTTTTCCTCGTAAAGAGCATTATCCTTGCCATACTTTATTTGCAAATTGGAGTCCTGTTTATTTTTCAACTCCTACAGAGAACAATGGATCTAAAGATTCTGACGCAGTTTTTTGGAGTGGAGGCCAGGTTACAGAAGAAGGCCTGAAATGGTTAATGGATAAAGGATATAAAACTGTTATAGATCTCAGAGCAGAAACTGCAAAAGACAACTATCAAGCAGCCATTCATGATGCTATTGCCTCTGGGAAAATTGAATTGGTCAAAATCCCAGTTGAAGTTAGGACCGCACCTTCAATGGAACAGGTTTTGAGGTTTGCATCTTATGTTTCTGATGCAGCAAAAGGCCCATCTATCTTCACAACAAGGAAGGAGTTTGGAGAACATCTGCCATGGTTTCCAGTTTCGTCCTCTACAAAGGGATCCAGAAAACCTCAGGATTCTTTGATGGCTTCAAATGGATCCTTCCTAGAAAAGAATACCAATTCTTTGCAAGAGAATCTGGGTGCACTGGGTGCAGCTCATGGTTCTGTTGAAATATTGGATAAAAGTGCCTCTCCAAAGAAGGATAACAAAAGGACACTAAGTAATGGGGCTTTCAATGATCTATTTCTGGAGATAAGTCAATAG 1377 0.4343 MSLHVPRGILCRHESAHLSGIRVLSPSHLCFFPPSLSTGNGRVFGYGLGLGFEWQRKKGRLRRRLKFVVNAELSKSFSLNFGLDSQNANSFQSHDPSQLPWIGPIPDDIAEIEAYRRIFRSSERLYSALVDALCNPFTGECSVSYDVPSDENPQLEDKTVSVPGCMVSLMNKGREGILSGRSSVMNSFRTVHVSTMGDNLPPLAIFRSEMKRCGESLHVALENYLISDDDQSINVWRKLQRLKNVCYDSGFPRKEHYPCHTLFANWSPVYFSTPTENNGSKDSDAVFWSGGQVTEEGLKWLMDKGYKTVIDLRAETAKDNYQAAIHDAIASGKIELVKIPVEVRTAPSMEQVLRFASYVSDAAKGPSIFTTRKEFGEHLPWFPVSSSTKGSRKPQDSLMASNGSFLEKNTNSLQENLGALGAAHGSVEILDKSASPKKDNKRTLSNGAFNDLFLEISQ 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0240 458 Gene3D Protein tyrosine phosphatase superfamily 278 369 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0240 Lele-ChrLele25 1435822 1438012 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0240 25 1435822 1438012 Lele01g0287 01 1624047 1628179 CCT
Lele25g0240 25 1435822 1438012 Lele02g0272 02 1545537 1550392 CCT
Lele25g0240 25 1435822 1438012 Lele04g0280 04 1645185 1650268 CCT
Lele01g0292 01 1667583 1675444 Lele25g0240 25 1435822 1438012 CCT
Lele02g0280 02 1599871 1607278 Lele25g0240 25 1435822 1438012 CCT
Lele03g0295 03 1656507 1659172 Lele25g0240 25 1435822 1438012 CCT
Lele04g0287 04 1687862 1705313 Lele25g0240 25 1435822 1438012 CCT
Lele25g0240 25 1435822 1438012 Lele27g1847 27 23290079 23295848 hybridization
Lele25g0240 25 1435822 1438012 Lele28g0262 28 1546283 1551643 hybridization