Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0238 ATGGGCTCGTGTGGGAAATCTAGTATATTAGATGACGCCCCAAGCGGGTCCGTTATTGAAGAGCAGTCATGCGCAGAGCTTCCATTGCAGTCTATTCCTGTGCACCGGTCCTGTCCAGGAGTAACCTGCAATGCATTGGACTCTAATGTCGAGCACTCCAATATGATGGAGGTCCACACTGGGTCTGCAAGCACCACTGATGTTACAGAGATGTCCAGAGATTCATCATCGATGGTGAACAAATATGAAAATACTGGTAGCTTACAATGCTCATGTAGAGTAGTTACTTGCAATGCGGTGGACTCTAATGTTGAGAACTCCAATATGATAGAAGGCTGTATGGATTTGTCTGGAGAGGTCCACACTGGGTCTTCAAGCTCCATTGATGTTCCAGAAATGTCCAGAGATTCTTTGTTGATGGCAAGCAAAAGTGAAAATACTGATAGTTTACAGTGGTCCTGTCCAGTAGTTACTAGCAATGTGTTGGACTCTAATGTTGAGCACTCCGATATGATGGAAGGCTGTATGAATTCGTCTAGAGAGGTCCACACAGGGTCTGTAAGCCCTGTTGATGTTACAGAGGTGCCGAAAGGTTCATTTTTTATGGTTAATCAAAATGAAAATAATGACATGTTACAACAGTCTTGTCCAGTAGTAAGTTGCAATGTGTTGGACTCTAATGTTGATCACTCCAATATGATGGAAAGTTGTATGAATTTATCTAGAGAGGTCCGCACTGGCTCTGCAAGCTCCATTGATGTTCAAGAGATGTCCAGAGATTCAATGTTGATGGTGAACAAAAATGAAAATACTGGTATATTACAAGAGTCTTGTCCAGCAGTAATTTCCAGTGTGTTGGACTCTGATGCTGATCACTCCAATATGATCGAAAGTTGCATGAATTTTTCTAGAGAAATCCACACTGGGTCTGCAGGCTCCATTGATGTTCAAGAGGTGTCCAGAGATTCAATGTTGATGGCGAACAAAAATGAAAATACTGGTATATTACAACAGTCTTTTCCAGCATTAATTTCCAGTGTGTTGGAGTCTGATGTTGAGTGCTCCAATATGGTTGAAGGTTGTATGAATTCGTCTAGAGAGGTCCACTCTGGGTCTGCAAGCCCCATTGATGCTTCAGACATAACCAGAAATTCATTGTTGGAGAACAAAAGTGAAAATACTGATATTTCAAAACAACCCTCTCTAGTAGCTACTTGTAATACGTTGGACTCTAATGTTGAGCACTCCAACGTGATGGAAGGTTGTATGAATTCGACTAGAGAGGTGGCAAGCTCTATTGATGCCCCAGAGGTAATCAGAGATTCATTGTTGATGGAGAACAAAAGTGAAAATACTGATATTTTACAACAGTCCTGTCCAGTAGTAACTAGCAATGCGTTGGACAGTAATGTTGAGCACTCCAACCTGATGGAAGGTTGTATGAATTCATCTAGAGAGGTCCATACAGGGCCTGCAAGCCCTATTGAATTTCCAGAGATGTCTGAAGATTCATTGTTGACGGTGAATAAAAGTGAAAATACTAAGATGTCACTTCTGGAGGAAACCTCAAAGAATGATAGCCAGACTTTTCCAAGTATATTTTGTGCGCAAATTAAACTTTCTAATCTAGAAAGTGTCAGGTTGGTCTCAGAAGGAAAACCTCTTGCCAAAGATGGCCTCAAAATGCCATCAGACTTCATATTGACCAGGAGATCACCTAAGGATTGTGTTAATCGGGATGGGCACAAGGATGATAAGAGCAACATATTCCACTCTGCAGGAGTTTCTTTAGCACTCATGGAAGGTGAAAATGATGCTGGTTTACCAACTGGCTTCCTGGTTTATTGCCACCAACAAAGCGAACAAGAGGACACAATGAAGAATGCTAATCCAGTGTTGGAGGGTGTGAACGGAGGTGATTTGAATTGTGAGATTGAAGCAGATGCCTGCGAGCAGACTCATTCACAGGGCAGTGAAGTACCCACAGATGTAATATATACTGAAGCAGAGGCCATAAGTGATCAGCTGCATGATCAGAAAGATGGTGGTGATGAGAATAGTCATTTTGAAGACTTTGTTGATAAAGAAAGTATCATTGACACACATGTCCAAGAATTCTCCTCACCAGGCCATCAAAGGATCCTGGGGAGTTTGCCTGTAGCTTTTTCACTTGGAGAGGCCACCCACTCAGAGAGGGGGATTGATAATGTTGTGGAAGTTAAGGGAAAAAATAATGATGTTATGACTGAAGTAAATGTTGAAACGAAGAATATGTCACAAGATGATAATGCATGTAAGTTAAGTGATAGTTCCTCAAAAACAGATGCCAACTGTACCTTGAGAAAAACGTTTCTTCCTGAATCAGATCTTCCTTCTGTTGATTATAGCAGTGTTAGTTCTCCAAAGGATGTGCCTGATCTTTTCAAGGAGGTCAATGGTTCCATCACTTATAGTAGCCTTGTGGGTGATTCTGGAGAGGCAGACTGTATTAGGAAAGATATTATACATGTTGATTGTTTCTCTGAAAGCAATTATTCTAGGAATACATCCTTGCCTATTCGAAGGAATAGTCGAAGAAGTAAATCTGGTCATAAGATGCAGAGCAGAAGGGCTTCGAGGAAATGCAAGAACAAAACCAATGTGCCACTCCTAGGTGGGGATATGAAGATAACCTTGGAGGCTGCTAGAAAGAAAAGAAGCTGTTTCTCTAAACCAGCTCGTTCTTCTATCTGGGGATTGGTAGGAAACATTAATAAGTTTTTTGAGCAAGATAATGAGCTTGGAGTTGATGAAGTTATGTGTCAAGGATTGGGGAAGGTGAGAGGTGCCCGCAAAAGTGGGAAGAGAAACAAGAGTGGTGCAGTTTCTAGATCATTGAGTTCAATGAAGAAATGCTGCGCTTCAACTACTCGTGTTCGTCTGAAGATTAAACTGGGGAAAGATGTTCATTTAAGTTGTTCAGATGTCTTGGTTCCAGAGTTTATGAATGGTTCAGGTTCTGCTTCTAATGTGGGGCCTGGTCCAGGCTCTCTGGAAAGAAACAACGATGCTGGAGATAAATGTTCAGAAGAGGTTGTGGTAGGCAAGTCTGAATCTTTAACAAACAACCTGGATGAGGACGCTCTAGTTCTGAATGGACAAATGGCAAATCACCACTTAGAAGCTGCTGCAACAACTGAAAAGCCAGATGAGGTCACAGAGGAAGTATGTCATATGATTCCTCCAGAGAGGATGATTGAACCTTTGAGAGAGACAGTTAATGATAAGGGGATGGATCCTGGAACTTCGCCTGATTCAGAAGTTATCAATTCAATTCCTGAAGTCCAGGTTGGAGAAAGACATCAACAAGGTTTGCAGGATGCTATTCTTGATTCTTCTAAGGCGTCTGATGCTCTTGGAGGAGTATCAGATTGCAGGAGAAGGAAGAAGAAAGACAAACTTACTTCCTCAAGTAGTTCTATTGTTGAAGATGGCTCACAAGGGCCACCAAGGAAAAATAAAACTAAGCACTCAAAGAATCGTGGACATAAAAAGAATTCCAATGATGTGGTTTGCTCCATGAGTTTGCATACTTCCACTGGTATAAATGCCGTGAGCTACTCAGTAAGCCATAAAGAATTATCCGGTGAATCCTTGGCCCCATCTGGAGAGATTGAACTTGAAGACTCCACTGAGGCTTTGAAAGTCAAAAGTAGCATGGAAGTTGAAACTACTTGTAGCCCAAATGACAATTATGAGCTTTTAGAATCCCAGGGAATTGGTAATTTGCTGTCTTCAGCCAGATCCTCAGGTCGTAAACTTCCTAAAAGTCTTACATCTTGTAAAATCATCACCCCCAAACCCAAATCAAAAGCTTCTGACTCAATGAGCCGGAAAAAGACTGGTAGCAGATGTAGGGAGAAACAGCTGAAACCTATTAAGAAGAGTGAAGTCAAGGGAAAAGCTGTCTCTGATAAAGTTATTTCTGAAGCAGAAGATTGTCTGCATGCAGAACATGTTGATGGAAGTTATAAATTGGATGATATTGGAAAAATTGCTGGTGACAACAAAGTATCAGTAAATGCATCCAATTCGGACATGGCAGTTGGTACTGGTTTGGAGGAGCAGCATCCATCACCTCATAATGCATGGGTGCGCTGTGATGAGTGTCACAAGTGGCGGCGTATTCCTGTTGAGCTTGCAGATCTAATTGAAGAAACAAAGTGCACCTGGACCTGTAAGGATAGCAATGATGAAGCCTTTTCTGATTGCTCTATCCCCCAAGAAAAGTCAAATGCAGAGATCAATGCAGAGTTGGGATTATCGGATGCTTCAGGTGAAGAAGATGCTTATGAAGGCTGTAAAAATTATAAGAAGTTGGAATATCATCACCCAACAGGGAACCTGCCCATGTGGGGATCTTTGTTCAAATCAACAGGTTACGGGTTGAAGGCAATTGAGGATATATCTAAAGGGAAGTTTCTTATTGAATATGTTGGGGAGATATTTTCTGAAGCTGAATTATGGAAGTTTGGATCCATTTTGATGGTTTTGTGCTATATTTTTGCTTTTTATGGGCCCCCATTGGAAAGATTATTTGCCTTCAATTGTAGAAAGAATAGGCTTACTGCTTCCTTTTATTACATTAATCATAGTGATGGGGGTGGACAACTCGAGTTGATCCATGTGCTTGATATGCATGCTTATGAGGCACGGCAAAGGGAGTATGCTTTCAAGGGTCATCGGCATTTCTACTTCATGACCTTGAATGGCAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGACGTTTCATTAATCATAGTTGTGATCCTAATTGCCGTACAGAAAAGTGGATGGTGAATGGTGAAATCTGTATTGGACTTTTTGCATTGAGGGATATAAAGCAGGGTGAAGAGGTGACATTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCCAAAAAATGTCATTGTGGTTCACCTATATGTCGTGGTTATATAGGTGGTGGTGATCCACTTAATGCTGAAGTCATTGTTCAAGGTGATTCAGATGAAGAATTTCCAGAACCAGTGATGCTTACGGAAGATGGTGAAATTGAAGGCAGTAGACCTAGATCTGATGTTGTGCAGGCTGAAAGGAATTTGTCAAAAGACAGAGATCACAAGTCCAGAAGTGCTCCAGTGCCCCATAATAATAATCAGGAGAAAGAGAACTCTGCAAACTCTCCTGCTATTTCCCTGTTGCACTGCCCATTAGATGTGGAAGATTCAATGGGCAAATTTCCATCATCTGACGTGGAAGAAATTTCTAAACAAATGGAGGATGGAATTAGTAAATCAGAGCTTCCTGACAATATTTCTTCCATCCAAAGAATGGAGGCTTCCGCTGCACCTATTAGTAAAGTGATATCAAAGTTTATTAAGAAGAAAAGGGAATCCAAGCCTGAAACAGTTGAAGACAGGCCTGGTTTTCTACAGACACATCTGCTTGTGAAGACTTCTCGAGCAAATGGTTCGGTTAAAAAGGGAAAGGTTCACGGTAATCATTCAAATGGCCTCAAAGCTGCAGTGACAGCCAACAGATTGCAGGCAACATCGATCAAACCTAAAAAGGTGGTGGAAGGTTCTTCCAATGGCCGTTTTGAAGCAGTTCAGGAGAAACTTAAGGAGTTGTTAGATGAAGATGGGGAAGGAGGGATAAGCAAAAGAAAAGATGCAACCAAAGGCTACTTAAAGCTTCTGCTTCTAACTGTGGCATCAGATGATAGGAATAATGGCGAAGCAATTCAAAGCAATCGAGATCTTTCCATGATCCTTGGGGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATGTAATTAACAAGAATGGTCTACAGATGTTGCATAACATTATGAAGCAGTACAGACGGGATTTCAAGAAAACTCCCATACTACGGAAGCTTCTTAAGGTCTTAGAGTATCTAGCAGCTAGCAAGATTTTGACATTTGAACACATTAATGGCGGGCCCCCCTGTCATGGAATGGAGAGCTTTAGGGAGTCCATGTTGTCTCTGACAGAGCATGATGATAAACAGGTCCATCAAATTGCTCGGACCTTTCGGGATAGATGGATTCGTAGACCTTTCAGAAGACATGGTTATGTGGACCGAGATGATTTTAAGGGAGAATCTCATAAGAATTTTAATTGCAATAGATTTTCAGCATCACAGAGTCATAGGCGGGAGCCAGATGTTAGACCTACGGAAGCAATAGATTGTGTCCAGCAATCAAAACCTGTGACAACTTCGGTAGAGGCTGGTGCCCAGGATGGCCGCTCTGCACTGTCTTCAGATGCGTGTAAAGTTGATGGGACAAAAAGGCGTAAGCGTAGAAGCAGATGGGATCAACCTGCAGAGACGATTTCAAATTCATCATCTAGTCCATGTAAGAAACAAAATGTTGATTCTGGGCTATCAATGCATGCTGATGCAGCTATTGACTCTTTTGCTGGAAGTCAGAACATTAGTGAGGATTTCCCCCCAGGTTTTGCATATCCTGTTCAACCACAATTGGGTTCTTCGAATTCTTCACCTCAACCTGTTGATCTTGCTTTGCAAAATGTGGGTAATTCTGGGCGTTCCCCTGATACGGTTATTGCACATCCAAAGGAGAAATTTAATTCTCGCATGCCTGTCTCATACGGAATGCCGTTATCTTTTGTCCAGCAGTTTGGCACACCTCATGCTGAAATATGTGGGAGTTGGGTCACTGCGCCAGGTGTGCCTTTTAGCCCATTTCCTCCATTGCCCCCCTATCCACGGGATAATAAAGACTGTCAACCTTTTAGTTATACTAATGCTGCAGCTGTAGATCAGCCTGTCGAAGTTCAGCAACGGGATTTGAGTGGTCCGGTTGGTCGTTACTCTGATGATCCTACTCCCAGCACAAATGATACTAGCCCTGAGGACATTGACCTTCCACATGAAGATGATCAACAACTTTATAAACGTTTGAAAGGTTCCTCTTGTGATTTGGGAAGCAGGTACTTTAGACAGCAAAAATGGAATAATTCAAAAATACATCGACCCTGGTTTAGGAGGAATGCGTGGGGATCGAGTGGGAACTACACTGCTGGAGGTAACTGCAGTGTAAGTAGTGTAGGAGATGAACCAAATGAGTCAAAAGTAATCTGTAGAGCGGAGGAAGGTGACAATAATGTTCAGTAA 7200 0.4196 MGSCGKSSILDDAPSGSVIEEQSCAELPLQSIPVHRSCPGVTCNALDSNVEHSNMMEVHTGSASTTDVTEMSRDSSSMVNKYENTGSLQCSCRVVTCNAVDSNVENSNMIEGCMDLSGEVHTGSSSSIDVPEMSRDSLLMASKSENTDSLQWSCPVVTSNVLDSNVEHSDMMEGCMNSSREVHTGSVSPVDVTEVPKGSFFMVNQNENNDMLQQSCPVVSCNVLDSNVDHSNMMESCMNLSREVRTGSASSIDVQEMSRDSMLMVNKNENTGILQESCPAVISSVLDSDADHSNMIESCMNFSREIHTGSAGSIDVQEVSRDSMLMANKNENTGILQQSFPALISSVLESDVECSNMVEGCMNSSREVHSGSASPIDASDITRNSLLENKSENTDISKQPSLVATCNTLDSNVEHSNVMEGCMNSTREVASSIDAPEVIRDSLLMENKSENTDILQQSCPVVTSNALDSNVEHSNLMEGCMNSSREVHTGPASPIEFPEMSEDSLLTVNKSENTKMSLLEETSKNDSQTFPSIFCAQIKLSNLESVRLVSEGKPLAKDGLKMPSDFILTRRSPKDCVNRDGHKDDKSNIFHSAGVSLALMEGENDAGLPTGFLVYCHQQSEQEDTMKNANPVLEGVNGGDLNCEIEADACEQTHSQGSEVPTDVIYTEAEAISDQLHDQKDGGDENSHFEDFVDKESIIDTHVQEFSSPGHQRILGSLPVAFSLGEATHSERGIDNVVEVKGKNNDVMTEVNVETKNMSQDDNACKLSDSSSKTDANCTLRKTFLPESDLPSVDYSSVSSPKDVPDLFKEVNGSITYSSLVGDSGEADCIRKDIIHVDCFSESNYSRNTSLPIRRNSRRSKSGHKMQSRRASRKCKNKTNVPLLGGDMKITLEAARKKRSCFSKPARSSIWGLVGNINKFFEQDNELGVDEVMCQGLGKVRGARKSGKRNKSGAVSRSLSSMKKCCASTTRVRLKIKLGKDVHLSCSDVLVPEFMNGSGSASNVGPGPGSLERNNDAGDKCSEEVVVGKSESLTNNLDEDALVLNGQMANHHLEAAATTEKPDEVTEEVCHMIPPERMIEPLRETVNDKGMDPGTSPDSEVINSIPEVQVGERHQQGLQDAILDSSKASDALGGVSDCRRRKKKDKLTSSSSSIVEDGSQGPPRKNKTKHSKNRGHKKNSNDVVCSMSLHTSTGINAVSYSVSHKELSGESLAPSGEIELEDSTEALKVKSSMEVETTCSPNDNYELLESQGIGNLLSSARSSGRKLPKSLTSCKIITPKPKSKASDSMSRKKTGSRCREKQLKPIKKSEVKGKAVSDKVISEAEDCLHAEHVDGSYKLDDIGKIAGDNKVSVNASNSDMAVGTGLEEQHPSPHNAWVRCDECHKWRRIPVELADLIEETKCTWTCKDSNDEAFSDCSIPQEKSNAEINAELGLSDASGEEDAYEGCKNYKKLEYHHPTGNLPMWGSLFKSTGYGLKAIEDISKGKFLIEYVGEIFSEAELWKFGSILMVLCYIFAFYGPPLERLFAFNCRKNRLTASFYYINHSDGGGQLELIHVLDMHAYEARQREYAFKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQGEEVTFDYNYVRVFGAAAKKCHCGSPICRGYIGGGDPLNAEVIVQGDSDEEFPEPVMLTEDGEIEGSRPRSDVVQAERNLSKDRDHKSRSAPVPHNNNQEKENSANSPAISLLHCPLDVEDSMGKFPSSDVEEISKQMEDGISKSELPDNISSIQRMEASAAPISKVISKFIKKKRESKPETVEDRPGFLQTHLLVKTSRANGSVKKGKVHGNHSNGLKAAVTANRLQATSIKPKKVVEGSSNGRFEAVQEKLKELLDEDGEGGISKRKDATKGYLKLLLLTVASDDRNNGEAIQSNRDLSMILGALLKTKSRAVLNDVINKNGLQMLHNIMKQYRRDFKKTPILRKLLKVLEYLAASKILTFEHINGGPPCHGMESFRESMLSLTEHDDKQVHQIARTFRDRWIRRPFRRHGYVDRDDFKGESHKNFNCNRFSASQSHRREPDVRPTEAIDCVQQSKPVTTSVEAGAQDGRSALSSDACKVDGTKRRKRRSRWDQPAETISNSSSSPCKKQNVDSGLSMHADAAIDSFAGSQNISEDFPPGFAYPVQPQLGSSNSSPQPVDLALQNVGNSGRSPDTVIAHPKEKFNSRMPVSYGMPLSFVQQFGTPHAEICGSWVTAPGVPFSPFPPLPPYPRDNKDCQPFSYTNAAAVDQPVEVQQRDLSGPVGRYSDDPTPSTNDTSPEDIDLPHEDDQQLYKRLKGSSCDLGSRYFRQQKWNNSKIHRPWFRRNAWGSSGNYTAGGNCSVSSVGDEPNESKVICRAEEGDNNVQ 2399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0238 2399 MobiDBLite consensus disorder prediction 1723 1738 - -
Lele25g0238 2399 Gene3D - 1366 1430 - -
Lele25g0238 2399 MobiDBLite consensus disorder prediction 850 879 - -
Lele25g0238 2399 MobiDBLite consensus disorder prediction 2171 2194 - -
Lele25g0238 2399 SMART PostSET_3 1648 1664 IPR003616 -
Lele25g0238 2399 SMART set_7 1462 1646 IPR001214 GO:0005515
Lele25g0238 2399 MobiDBLite consensus disorder prediction 1134 1150 - -
Lele25g0238 2399 Pfam SET domain 1473 1640 IPR001214 GO:0005515
Lele25g0238 2399 MobiDBLite consensus disorder prediction 2085 2101 - -
Lele25g0238 2399 SUPERFAMILY SET domain 1470 1661 IPR046341 -
Lele25g0238 2399 MobiDBLite consensus disorder prediction 2362 2381 - -
Lele25g0238 2399 MobiDBLite consensus disorder prediction 2128 2145 - -
Lele25g0238 2399 Gene3D SET domain 1467 1667 IPR046341 -
Lele25g0238 2399 MobiDBLite consensus disorder prediction 857 876 - -
Lele25g0238 2399 ProSiteProfiles SET domain profile. 1451 1640 IPR001214 GO:0005515
Lele25g0238 2399 MobiDBLite consensus disorder prediction 1123 1182 - -
Lele25g0238 2399 MobiDBLite consensus disorder prediction 1278 1301 - -
Lele25g0238 2399 Pfam CW-type Zinc Finger 1377 1423 IPR011124 GO:0008270
Lele25g0238 2399 MobiDBLite consensus disorder prediction 1285 1301 - -
Lele25g0238 2399 MobiDBLite consensus disorder prediction 2362 2399 - -
Lele25g0238 2399 ProSiteProfiles Post-SET domain profile. 1648 1664 IPR003616 -
Lele25g0238 2399 MobiDBLite consensus disorder prediction 2276 2319 - -
Lele25g0238 2399 MobiDBLite consensus disorder prediction 2179 2194 - -
Lele25g0238 2399 MobiDBLite consensus disorder prediction 1690 1738 - -
Lele25g0238 2399 MobiDBLite consensus disorder prediction 2112 2127 - -
Lele25g0238 2399 ProSiteProfiles Zinc finger CW-type profile. 1371 1425 IPR011124 GO:0008270
Lele25g0238 2399 MobiDBLite consensus disorder prediction 2065 2146 - -
Lele25g0238 2399 MobiDBLite consensus disorder prediction 1692 1722 - -
Lele25g0238 2399 PANTHER SET DOMAIN PROTEINS 873 1455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0238 Lele-ChrLele25 1406716 1422093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0238 1470 1663 C2H2 Transcription Factor Family AT2G23740 27.670 3.37e-11 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele25g0238 SET 1.2e-20 No_clan