Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0236 ATGCTGAAAGCGGGCCTAGCCGGAGAAGGCAGCAACGGTAAATCAAGTGGCCGGACGTTGTTGGTGGGAGTGAAGTTGGATTCTCCCAGCAGGGAGTTGCTCACATGGGCTTTAGTTAAGGTTGCTCAGCCTGGTGATATTGTGGTTGCTCTTCATGTTCTTGGGGAATATGCCATTGTGAACCGAGACGGGAAGGCGTCGCTTCTTTCGCTTGTCAAGGCATTTGACTCTGTTCTGGCTGTTTACGAAGGTTTTTGCAATTTGAAACAGGTCGATCTAAAGCTCAAAGTCTGCCGAGGCTCGTCAGTCCGGAAAATCTTAGTTAGAGAAGCAAACGCCTATTCTGCAACTCATATTTTGGTGGGTACTGCTCAAGGCCTTCATAGAATGCGAACATCTACCTCCGTAGCTAAGTACTGTGCTAAGAAGCTTTCCAAGGACTGCTGGGTTATTGCTGTCAATAATGGAAAAGTTGTGTTCAAGAGAGAAGGCTCATCAGCAGCTCCTGTTGACTTGCAAGGAATTGAGAGTCGTGGCAAAAATGGCTTGCTTGCTTCAATTCACCGGACATTCAGTTCTAGTTCCAAAGTACTAAATGATGACAACACAGGAATACTTGACAAGGGTACTTGTAAAACTTCAGATAACAGCTTAGCCAAGGCCTTTCTTGATTCTACAGAAACCGTTCAGAAACGGAGCTGCTCAATTTGTGGTCCATCACATGCATTGCCAAATTCTGCTTGCGACCAAGCTGCAGAAGAGTCTTATGGTGATAGTGACAAAGAGAATTCTATGTCTATAGTTCTTGCACAGCCTACTGAGGCAGCATCAAGTGCTAGCGTTCTGTCAGTCAGAGAATTGCCTGAACTAAAACCCGGTTGGCCACTACTACACAGGACAATTTCATCAGGTCGGCAATCTCCTGGCAGATCATTGGTGCGCCAGATCTCAGTGGTTCAGTGGGCAATGCAGTTGCCGAGTAGAAATTTTGCAGGGGATCAGGTTCACAGGCCAGCCAGTTCTGATCCAGATCATCATCAATCTTTGGCTTTAGATAGCGAGAGTGGTGCTATTGTTCCAGTAAATGCTCAAATGGGGACTGCCTCTTCGCCTGACCATAATTCAAGAAAAATTCCAAAAGAATTGGAGGGTCTTCATGAGAAATACTCATCAATCTGCAGATTGTTTCAGTACCAAGAACTTTTATTGGCTACGTCAAATTTCTTGCCTGAAAATTTGATCGGGGAAGGAGGAAGTAGTCAGGTTTATAGAGGCTATCTTCCTGATGGCAAGGAACTAGCAGTTAAGATCTTAAAGCCCTCTGATGATGTTTTAAAGGAGTTTCTTTTGGAAATAGAAATTATCACTACCTTGCATCACAAGAACATTATTTCTCTCCTGGGATTCTGCATTGAGGATGGCAATCTTCTTTTGGTATATGATTTCTTGTCAAGAGGAAGCCTTGAAGAGATTCTTCATGGGAGCAAGAAAAATCCACTTGTGTTTGGTTGGACGGAGCGGTATAAGGTGGCAGTTGGTGTTGCTGAGGCTCTGGATTATCTGCATAATAGAGATGCTCAACGTGTGATTCACAGGGACGTGAAGTCATCAAATGTATTGTTATCTGAGGATTTTGAACCCCAGCTATCTGATTTTGGGCTTGCTAAATGGGCATCAAATTCATCTCACATAACTTGCACAGACGTTGCTGGGACCTTTGGCTACTTGGCTCCAGAGTATTTCATGTATGGCAAAGTAAATGCTAAGATTGATGTCTACGCATTTGGAGTCGTACTCCTTGAGCTTCTAACAGGAAGAAAGCCCATAAGTTGTGATTATCCTAAAGGTCAAGAGAGCCTCGTCATGTGGGCAAGTCCCATTCTGAATAGCGGAAAAGTTGCACAATTATTAGATCCAAGTCTGGGTAGTACCTACGATCGGGACCAGATGGAGAGGATGGTCTTGGCAGCCTCACTTTGCATCAGACGTGCTCCGGGAGCTAGGCCTCAAATGAGCCTTATAACAAAACTCCTTCAAGGCGACGCTGATGTAATTAAGTGGGCAAGGTTAGAAGTTAACGCTTCTAAGGCATCAGAAACGCACGACGATGAAGATTGTCCACCTTCTAATTTACAGTCACATCTCAATCTAGCATTACTTGATGTGGAGGATGATTCACTCTCCATGTGCAGTATTGATCAAAATGTGTCGTTAGAGGACTACTTGAAAGGCAGGTGGAGCCGCTCATCAAGCTTTGATTGA 2262 0.4452 MLKAGLAGEGSNGKSSGRTLLVGVKLDSPSRELLTWALVKVAQPGDIVVALHVLGEYAIVNRDGKASLLSLVKAFDSVLAVYEGFCNLKQVDLKLKVCRGSSVRKILVREANAYSATHILVGTAQGLHRMRTSTSVAKYCAKKLSKDCWVIAVNNGKVVFKREGSSAAPVDLQGIESRGKNGLLASIHRTFSSSSKVLNDDNTGILDKGTCKTSDNSLAKAFLDSTETVQKRSCSICGPSHALPNSACDQAAEESYGDSDKENSMSIVLAQPTEAASSASVLSVRELPELKPGWPLLHRTISSGRQSPGRSLVRQISVVQWAMQLPSRNFAGDQVHRPASSDPDHHQSLALDSESGAIVPVNAQMGTASSPDHNSRKIPKELEGLHEKYSSICRLFQYQELLLATSNFLPENLIGEGGSSQVYRGYLPDGKELAVKILKPSDDVLKEFLLEIEIITTLHHKNIISLLGFCIEDGNLLLVYDFLSRGSLEEILHGSKKNPLVFGWTERYKVAVGVAEALDYLHNRDAQRVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASNSSHITCTDVAGTFGYLAPEYFMYGKVNAKIDVYAFGVVLLELLTGRKPISCDYPKGQESLVMWASPILNSGKVAQLLDPSLGSTYDRDQMERMVLAASLCIRRAPGARPQMSLITKLLQGDADVIKWARLEVNASKASETHDDEDCPPSNLQSHLNLALLDVEDDSLSMCSIDQNVSLEDYLKGRWSRSSSFD 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0236 753 Gene3D HUPs 17 154 IPR014729 -
Lele25g0236 753 SUPERFAMILY Protein kinase-like (PK-like) 389 681 IPR011009 -
Lele25g0236 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Lele25g0236 753 CDD USP_Like 19 151 - -
Lele25g0236 753 FunFam Putative receptor-like serine/threonine-protein kinase 483 694 - -
Lele25g0236 753 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 377 482 - -
Lele25g0236 753 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 17 154 - -
Lele25g0236 753 Pfam Protein kinase domain 412 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0236 753 ProSitePatterns Protein kinases ATP-binding region signature. 414 436 IPR017441 GO:0005524
Lele25g0236 753 ProSiteProfiles Protein kinase domain profile. 408 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0236 753 CDD STKc_IRAK 414 680 - -
Lele25g0236 753 SMART serkin_6 408 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0236 753 Pfam Universal stress protein family 18 151 IPR006016 -
Lele25g0236 753 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 151 - -
Lele25g0236 753 PANTHER OS08G0249100 PROTEIN 77 703 - -
Lele25g0236 753 Gene3D Phosphorylase Kinase; domain 1 372 482 - -
Lele25g0236 753 Gene3D Transferase(Phosphotransferase) domain 1 483 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0236 Lele-ChrLele25 1390218 1393624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0236 395 674 Trihelix Transcription Factor Family AT1G68690 46.853 4.10e-76 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele25g0236 Pkinase 5.2e-44 CL0016