Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0235 ATGGATCACCCCTCTCACTTCCATCACCAGCAACAGCAGCAGGCAAGGTACGCTCCTCTTCCCCCTCATCACCCGCGCCATTCACAGTTCCCCGAAGATCCCCGTTTGCGCCCTCACCACCTTCCTCCTCCGCCTCCTCCGGCGGCACCAACTCTTCCACCCCCTCCCACTCCTCCGTCTGTTACCTATCGAAACGTCCGCACCCTTCCTCCACCGCATCCTCACCCCTACAATCCTTCTCTTCAATCCCAGTTTTCTTTCAACGCCCCGAATTATGCCCACCGTTCGGTTGAAGAAGAACGCCATGTATCTGCTAGACACCCTCACGATTTCACACACTCGCAGAGGGTTTCAAATAGGATGATTATTGATAATGATCATCCTCGCCACGGTCTCCCTGATTTCGACTATCGCAATACCGTTAACCGCACCGGTGGTTGGAACCAACCGAGGGTTTTGTCAGATAATAGGCCGTCGAGGCCTTACCCTCCTTCTGACTTTGACCGGGAGTTGCATCACCAGCAGCCATTGAATCACAAAATAGCGGAGCCATATCTGCCAATTGATAAACTTAGGTATAATTCAGCGGGCAACTCGAGGGTAAGAGTTGATCATATTGATGGGTATGAAGTCAAGACAAGGGAAGAGTTTGGATGGGGTAGAGGTGATGAGAAATTTCATCGCCGCAGAGATTTTACATCAAATCTCAATGCACGTTCTGGAGACTTCGGAATCATGTCTAGTCAGAGTACGTTATCAAGGGATCTTGATTCGAAAAATGCGGATTATGTGCATTACGGCATGGAACGGGACAGCGAAATATCTAGGGGTACTAGAGGAGATGGACTTGGTGATAACAAGAGGTGGGTAAATGATAGGAAGGGCCTCAGAGACCCACACAGCTCATCTTTTGAATTGGGAAACAACGAGAACGGTGGTGATGGTATTCGGGTAACGTCCGCGAAGTATTATGGTTCGGATGTGGGTAGATATAATAATAGAGTGAACAGGGAATCTGGTCTTGAATTTAGTCGTGCTCCAAGGAAACAAATTCAGAAAAAGAGTGCGCTTCTGAGAATTCAAATGGCAAAACCAAATCATAAGAACCGTGAGATTGAACAGTTACAATATACCAGTTATGTCGATGACTCAAACTCTAATTCCTTTAGAGGCAAAGATCAATTTGAATATTCAGGTTCTGGGGTCAAGGCAGAAGAGAGAGAGAGAAGTCCTGTTGAGCTTGATATTTCTTTTAAATCAAATTCTCTGGTGGCTAAGGCCATTGTGGCACCTTCAAGTTCTGCAGTTTCTGATGCAGATATCACATCTGTTTCTGATACAGATTTTGCTCCTGCAGAAAAAGGAAAAAATGGTTTGGCCTCTGATAGCGATTCTCCTGATTTAAAACCTTCCAAACCATCTATGGCTGCTGTAAACTCAGGTGGCTCACCATGCAAGGTGAATTGCATCGCTAGTTCTAGCAGTGAATTTAACTTACAGAAGAAGGTCTCTGATAGTTGTTCTCAGCTTTGTGCCCGTGTAACTGCTAATTGTCATGTAAAAAATGAGGGGACTCTAATCCCCAAGGGAATTGTTTCTCATGAAATTACCAACTCCTGTTCTGTTAAACCATCTCCAAGGGTAGCCAAGAAGAAGAAAATTGTAAAGAAAGTGGTGAAGAAAGTTGTTTTGAATCCTAAATTAAATGTCTCCAGTTCCATGTCCTCAAATATGCCTGATCGAACTGTGAAAGCTGATAGTGTTAGTCCTTCATCTACCTCTGGATCTGACAAAACTGGAACTTCTTTAATGAAGAAAATCACTGCTGTTGACAACGTGTCCTTGCCAGATAATTTGTTGTCTTATCCAGAGGAAGGACATCTGCTGCCCGATAATAGAAAGGAAAATCTACGTCTGTTTAGTACAGGGACACATACCAGTTCACAAAAGCATGGGGCTGATGATAACGCTGATACAGGGGAAGTAGATAGAATTGAAAGAAGTAAAAACGTTTCTAATTCTTCATTGAGTGCTTTTAGCACTAAAGATGAAAAGAATGATTCTGATTGTCCGAATGCAGATGATTTTGTCCATGGATTGCGCAGTAATCCAAATACTGACAAGGCTGCTAAGGCTAAGTCACCAAATGGAATTACTTTTTCTGATATTAGTAACAGGGATGATGTTAATATGCAACTTTGTCAGAATGAGGTGTCCCTATCACCTCAGCAGTCAAATGTACAATATTTAGATAATCAGTTTCATGTAGAAGAGGATAAGAACAGCAGACTGTCAACATCTGCTGAGAGTGTAATTAACACAGATGTTATAAACACATATAATTCTGCTAATTTTAGTCCGGCTTGCTTGAGTTTTAATGACCTTGCTAGTAATGCACAAAAGAACATTACAGTTTCTGACTTTGGAAATGATGGCAAGTTAGATTGCAAAACTAAAGCCCTTGCGTTATCTGACAGTCTTATTTTGGAAGAAAACCCAGAGACTTGCTCCCCTGTACCAAGCGTTGGAATGGATAGTCTTTCAAGTTCTGCGGAAACTAGGATTTCAGATGGTCAAGAATGCCCAAAACATTCAAGAGTACCCATGCATGTTTCTGATAACAGCCCTCCTAATTCAGAAGAGAATATCATGGTTCCCCATAGTGTTATTGTCAAAGATTCTGGAAATGAGGCATCCCCTGTGGATGTCACTGCATCTCCTGAGAATAGTACCACAGAACAGTCTCCAAATGTTAATTTTTTGGTTAGATTTGCTGAAGGAGATACAAATATGTCTAAAAAAAGAAAAGTTGAGACACATTTAAATTTTTCAAGTTCAGATATCGGGGGCACATCTACAGGTCCTATACATACAGTTAGCCTTACAAATGTGTATAAAACCTCAAGTCTGTTGAAGGATTCAAGTGTGTCAGAAGTTTTAAATCCATATGTTCAAAGCTCAGAGTTTTGCTTACAATCCAGCACAAGTGGGGCTACTGGTTTGCATGGGAAGAGGGAGGTTTCTGAGACTGAAGTTTACTTTGGAAATAGTGTCAGTAACAGTGCAAATAGAGCTTCACCATTGTCTAAAATAAATGAAGTCACTACTAGTTCCATGAATGTTACTTTATTGCAAGCTGAACTTTGTGATGCAATTGTGGTTGCCACATCTTGTGCAGAAGTTCCTATTAGTGTTAGGGATAACAAGACACACCAGAAAGAGGTTGCATTTTCAAGCATGGTTGAACCTTCTGCTTCTCTATCCCTGCCTTATCCTGAGAGTAGTGCTAAATTGTACAAAAATAGTTTGTTTGAAGGATCTGTTGAGTCTATGGATGCAAATACAAATATTACGAAGTTTGAATTCTCCCAATTGCAGCACCCATCCATCAACTGTGATTCACTTGAGGATTTGACTATTCCAAATGATCAGTTTCCAGTGCTGGAAGACGAGCAGAAAGAAAATTCTCTTCCAGTTGTGCCTATAAACAACATTCAGGATGACATTCTGGTTTCTGGAAATACTGAGAGAGAGAAGATTGATATACAGGATGCTGGGAAGTGTGAGCCCAGAGGATTTGAAGATAGATCTCCGAGTGTTGATTTGGAATCCAGTAATCCTCAAACAAAGGATGATTTACCTCTTGAGCATCAATCTCTGTCCTGCCCAGCTGATACTGATTCTGTAACAACAAGTGACTGCAGTACAGTATCAGATATACCTTCTCCGGGGACCATGCCTGACATGCTTGATAATAGGACTTCAAACTGTCAAGCAATCCAAAATGAAATCATTCAAGTGGATGAAGATAATGCGGAGAGCAGATCTAAGGTTGAACAGGATTGTGACTTACCTGCGTCTACATCATATTCACAGTATACTAAAAAGAATATAAAGTCAAGTCCTCCAGCTAGACGTGATAACTTGATCACAGGGAAGATGATGCCTCAAGCTTTGCAAGTTGATTCCAAAGTTATGACTCAAGGACTGAATCCATCTTGTTCAGAGTTAAATTTTGGCAAAAGTCACTCGGGTTCTACCATTCCTACCACTTTCCAAGGTCGATCCTACTTAAATTTTCCCAAGTCAAAGACATCTGCATATTCAACCCCGGTTTCAAAACTTCGAACTTGGCATCGTACAGATAATAATTCAGGTTCTCTACCGGGAAATAAGCCTTTGGCAGGATCTGTGCCTCCCAAAAGGTCAATTTCAGAAAAGAAAGGGAAAATTCAAAGTACTTCTTACATTCGTAAAAGTAACAGCAGTATTGTAAGGAAACATACTTCTGTTTCTGCTTCATTACAATCCACTGCTAATCAGTCTTCTTCTTTGGGGTATGATGAATTTCATAGGAGAACTGGATCTGATATTATGGTTGAAATCTCAAATCACACAAATCTCTTGAAAACAGGATTGGCACACGCTCCTCTGGAGAGGCAAAGAACACCTCCACTACCTGTTGACACTAAATTACCTGATCATATGGTAACAGCATGTGAGGAGAATAAATCTTCCTCATTAATAGAACCCCTTTCCAATGCTTTCCGTGATAATGCATCTGAATCTAGAAACTTTACAGTCCCTTGTGATGCTCCAAACTCTGCTGATGAGGCACTGAAGTTGGATGAAACTGTTGAAAGTCTAACTGTTCCATCAAACAATGTGGAAAGCCAAGTCGAAGCACATGATGAGAATGTGCCTTTGAATTCAAAGAGAATAGTCTATGTAAAGCGCAAATCAAATCAGTTGGTTGCAACTTCAAATTCTTGTGAACTTTCTGTTGCTACTGATGACAAGGTCCAGGTGGCCTCTTCCGATGGGTACTACAAGAGGAGCAAAAATCAGCTAGTTAGGACTACTTTTGAAAGTCAAATCAACCAGACAGTTGCAATGCCGGCTGTAAACTCTGATGTGCACAGGGCCCGTAAAGCTAGTTGCAACAGGAGGTTTGATAAGAGGCGGTCTCTGAAGGTTGTTGGAAGGTCATGCAAACCTTTGAGAGCCTCATTGGTGTGGACTCTCTGTGGTGCCAGCTCGTTGAAAAATGACAATGGCTCTCTACATCATCAGAAGATTCTGCCTCATTTGTTTCCCTGGAAAAGAGCAACATATTTAAGGAGTTTCATTTCTAATCCTGCTTTGAGCTCCAATACTAATTCATTATCTGCTATCAGCAAGAAATTGGTTCTGTCGAGAAAGAGGGATACTGTTTATACTAGATCAAACCATGGATTTTCCCTTCGGAAATCCAAGGTGTTAGGCGTTGGTGGATATAGTCTAAAATGGTCAAAATCAATTGAGAAGTCATCAAAGAAAGCTAACGAGGAAGCCACGCTTGCAGTTGCTGCTGTAGAGAAGAAGAGGGAACGGAAAGATGTTGCTTCTATCAGTTCTCGGGCCAAGAGAGAACGTATTTTTCGCATTGGGTCAGTTCGTTACAGAATGGACTCTTCCGGGAGGACTCTTCTAAGGATTTCAGATGATGAATCCCTGCCCTCTGCTTCTCTCCGTTCAGGTTTGCATGTGAAAAGTTCATACATTCCCAGGAGATTAGTGATTGGAAATGATGAATATGTACAAATTGGCAATGGCCATAAGCTTATCAGAGACCCAAAGAAGCGAACTCGAATATTGGCTAATGAAAAAGTTAGATGGAGTTTACATACAGCTAGACAACGGTTGGCTCGAAAGCAGAAGTATTGTCAATTCTTTACTAGATTCGGGAAATGTAACAAGGATGACAGGATGTGTCCCTATATTCATGATCCCTCAAAAATTGCTGTCTGTACTAAGTTTCTGAATGGTTTATGTTCCACTCCCAACTGCAAATTGACTCATAAGATTATTCCAGAGAGAATGCCCGATTGCTCTTATTTTTTGCAAGGTTTATGCACAAACAGAAATTGCCCCTATAGACATGTTAATGTGAACCCTAAGGCATCCGTTTGTGAAGGATTTCTCCGGGGATATTGTTCCGATGGCAATGAGTGTCGGAAGAAGCACACCTATGTCTGCCCTACTTTTGAAGCAACAGGAATCTGTACCCAAGGGACCAAATGCAAACTTCATCACCCCCAAAAACAAGGCAAGGGAAAGAAAAGGAAGGGATCGGTAGATCAGAGAAACTGTAAAAGGAGATACTTTGGTTCTTTACGGATTGGTGTTTCTGAACCTGGGACGACGGTTGTAGCTCCAAGGCAAGGGGGACAAAATAAGGATGAACTTGAAGGAGAACTTACTGACTATATCAATCTCGATGTCGAGGATGAAGATATTGCAGAACTTACGGGACAAGCAAGCGAGCAATCAACATTGCGTGATAGTGAACCTGTAGATATAGTATTAGATGATCAGGATGAACTCATTAAACCTGTTCTGATAATGAAAAAGGATATTAGGGCTCAGGCATCTCCTGTCTGA 6423 0.4165 MDHPSHFHHQQQQQARYAPLPPHHPRHSQFPEDPRLRPHHLPPPPPPAAPTLPPPPTPPSVTYRNVRTLPPPHPHPYNPSLQSQFSFNAPNYAHRSVEEERHVSARHPHDFTHSQRVSNRMIIDNDHPRHGLPDFDYRNTVNRTGGWNQPRVLSDNRPSRPYPPSDFDRELHHQQPLNHKIAEPYLPIDKLRYNSAGNSRVRVDHIDGYEVKTREEFGWGRGDEKFHRRRDFTSNLNARSGDFGIMSSQSTLSRDLDSKNADYVHYGMERDSEISRGTRGDGLGDNKRWVNDRKGLRDPHSSSFELGNNENGGDGIRVTSAKYYGSDVGRYNNRVNRESGLEFSRAPRKQIQKKSALLRIQMAKPNHKNREIEQLQYTSYVDDSNSNSFRGKDQFEYSGSGVKAEERERSPVELDISFKSNSLVAKAIVAPSSSAVSDADITSVSDTDFAPAEKGKNGLASDSDSPDLKPSKPSMAAVNSGGSPCKVNCIASSSSEFNLQKKVSDSCSQLCARVTANCHVKNEGTLIPKGIVSHEITNSCSVKPSPRVAKKKKIVKKVVKKVVLNPKLNVSSSMSSNMPDRTVKADSVSPSSTSGSDKTGTSLMKKITAVDNVSLPDNLLSYPEEGHLLPDNRKENLRLFSTGTHTSSQKHGADDNADTGEVDRIERSKNVSNSSLSAFSTKDEKNDSDCPNADDFVHGLRSNPNTDKAAKAKSPNGITFSDISNRDDVNMQLCQNEVSLSPQQSNVQYLDNQFHVEEDKNSRLSTSAESVINTDVINTYNSANFSPACLSFNDLASNAQKNITVSDFGNDGKLDCKTKALALSDSLILEENPETCSPVPSVGMDSLSSSAETRISDGQECPKHSRVPMHVSDNSPPNSEENIMVPHSVIVKDSGNEASPVDVTASPENSTTEQSPNVNFLVRFAEGDTNMSKKRKVETHLNFSSSDIGGTSTGPIHTVSLTNVYKTSSLLKDSSVSEVLNPYVQSSEFCLQSSTSGATGLHGKREVSETEVYFGNSVSNSANRASPLSKINEVTTSSMNVTLLQAELCDAIVVATSCAEVPISVRDNKTHQKEVAFSSMVEPSASLSLPYPESSAKLYKNSLFEGSVESMDANTNITKFEFSQLQHPSINCDSLEDLTIPNDQFPVLEDEQKENSLPVVPINNIQDDILVSGNTEREKIDIQDAGKCEPRGFEDRSPSVDLESSNPQTKDDLPLEHQSLSCPADTDSVTTSDCSTVSDIPSPGTMPDMLDNRTSNCQAIQNEIIQVDEDNAESRSKVEQDCDLPASTSYSQYTKKNIKSSPPARRDNLITGKMMPQALQVDSKVMTQGLNPSCSELNFGKSHSGSTIPTTFQGRSYLNFPKSKTSAYSTPVSKLRTWHRTDNNSGSLPGNKPLAGSVPPKRSISEKKGKIQSTSYIRKSNSSIVRKHTSVSASLQSTANQSSSLGYDEFHRRTGSDIMVEISNHTNLLKTGLAHAPLERQRTPPLPVDTKLPDHMVTACEENKSSSLIEPLSNAFRDNASESRNFTVPCDAPNSADEALKLDETVESLTVPSNNVESQVEAHDENVPLNSKRIVYVKRKSNQLVATSNSCELSVATDDKVQVASSDGYYKRSKNQLVRTTFESQINQTVAMPAVNSDVHRARKASCNRRFDKRRSLKVVGRSCKPLRASLVWTLCGASSLKNDNGSLHHQKILPHLFPWKRATYLRSFISNPALSSNTNSLSAISKKLVLSRKRDTVYTRSNHGFSLRKSKVLGVGGYSLKWSKSIEKSSKKANEEATLAVAAVEKKRERKDVASISSRAKRERIFRIGSVRYRMDSSGRTLLRISDDESLPSASLRSGLHVKSSYIPRRLVIGNDEYVQIGNGHKLIRDPKKRTRILANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDDRMCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKIIPERMPDCSYFLQGLCTNRNCPYRHVNVNPKASVCEGFLRGYCSDGNECRKKHTYVCPTFEATGICTQGTKCKLHHPQKQGKGKKRKGSVDQRNCKRRYFGSLRIGVSEPGTTVVAPRQGGQNKDELEGELTDYINLDVEDEDIAELTGQASEQSTLRDSEPVDIVLDDQDELIKPVLIMKKDIRAQASPV 2140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0235 2140 MobiDBLite consensus disorder prediction 40 61 - -
Lele25g0235 2140 MobiDBLite consensus disorder prediction 1199 1245 - -
Lele25g0235 2140 MobiDBLite consensus disorder prediction 644 722 - -
Lele25g0235 2140 MobiDBLite consensus disorder prediction 1185 1245 - -
Lele25g0235 2140 MobiDBLite consensus disorder prediction 1 82 - -
Lele25g0235 2140 SMART c3hfinal6 1925 1949 IPR000571 GO:0046872
Lele25g0235 2140 SMART c3hfinal6 1896 1924 IPR000571 GO:0046872
Lele25g0235 2140 SMART c3hfinal6 1951 1976 IPR000571 GO:0046872
Lele25g0235 2140 SMART c3hfinal6 1978 2004 IPR000571 GO:0046872
Lele25g0235 2140 SMART c3hfinal6 2005 2027 IPR000571 GO:0046872
Lele25g0235 2140 Gene3D - 1979 2039 - -
Lele25g0235 2140 ProSiteProfiles Zinc finger C3H1-type profile. 1896 1925 IPR000571 GO:0046872
Lele25g0235 2140 MobiDBLite consensus disorder prediction 275 311 - -
Lele25g0235 2140 FunFam zinc finger CCCH domain-containing protein 3 1926 1977 - -
Lele25g0235 2140 MobiDBLite consensus disorder prediction 707 722 - -
Lele25g0235 2140 ProSiteProfiles Zinc finger C3H1-type profile. 1978 2005 IPR000571 GO:0046872
Lele25g0235 2140 MobiDBLite consensus disorder prediction 857 882 - -
Lele25g0235 2140 MobiDBLite consensus disorder prediction 651 668 - -
Lele25g0235 2140 FunFam Zinc finger CCCH domain-containing protein 7 1979 2040 - -
Lele25g0235 2140 MobiDBLite consensus disorder prediction 1379 1413 - -
Lele25g0235 2140 MobiDBLite consensus disorder prediction 388 411 - -
Lele25g0235 2140 Gene3D - 1923 1978 - -
Lele25g0235 2140 PANTHER CCCH ZINGC FINGER 338 2132 - -
Lele25g0235 2140 MobiDBLite consensus disorder prediction 275 300 - -
Lele25g0235 2140 MobiDBLite consensus disorder prediction 143 170 - -
Lele25g0235 2140 ProSiteProfiles Zinc finger C3H1-type profile. 1951 1977 IPR000571 GO:0046872
Lele25g0235 2140 MobiDBLite consensus disorder prediction 570 600 - -
Lele25g0235 2140 MobiDBLite consensus disorder prediction 447 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0235 Lele-ChrLele25 1374007 1383373 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele25g0235 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0235 25 1374007 1383373 Lele27g1852 27 23348970 23358360 hybridization
Lele25g0235 25 1374007 1383373 Lele28g0257 28 1490502 1500938 hybridization