Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0231 ATGAAAGTGACGTGGAAGAACACCAAGAAACGCTCTTTCCCGGCGGTGTCCAACTTCAGTAACCTTCCTTTCGAGCATCAAGAGGAGGATGTGACTCCTCATCAAGACCTTGCTCGTGCCGAGATCGGTGCTCCTAACACTGACCAATCCGAAGACCAAGATAGTCCCAATCACTCCGACTTATCGGAAGCAAGTCGTCTGGCCAAAGAATTTCAAGCTCAGGGAGACAAGCTTGCTGAGGATGGGAAGTACGGGGAAGCATTAGGTAAATGGGAGTCTGCTCTGTCATTGACACCTGAAGTTGCGGTTTTACATGAACAGAAGGCCCAAGTTCTACTGGAAATTGGAGATGCTTGGAATGCTTTGAAGGCTGCAATGCGTGTGTCCCTGCTCTCTATTCTTAATCTTGTGTATTTTAACTGAGCTACGGAATTGCAGCCATCATGGGCTGAGGCATGGGTCACACTTGGCAGGACACAGCTAAATTTTGGCGAGCCTGATTGTGCTATCGAGAGCTTTGACAGAGCCCTATCTATCAAGCCTGATTGCGCAGATGCTCAAGAAGACGGAAAAACTGCATTACGTCTTGTAAAGAAGAGAAAGCAACTGCACTCAGCGGGCTTGAGTAATACTAAAAGTCGTTATGCGGTAGGTGATAAAGACGGTAATGATCTGGTCTACATGGAGCGGGCAAAATTCAGGACGGATCACCAATCAAAATTTGCGACTTCGGGTAACAGCAAGCGCCTGTTTGAGGAAATGCAGGAAACCGATGACGTAAACTCAATGCAATGCCTTTCATGCCAGGATTATTACGTCCCAGGGGACGCCGGCACCTGCAAGGAGTGCTACGAAGAAGCCAACGAGACCGAGGAGGAGCTCAAGAATGAGATCGACCACTTGAAGGCCAAAGTTGCCTTCCTCAGCCTCTTGTCTCCTGTTGATCACCATAATCGCTCCGATACTGACGTTATTTTGGTTCCCTCCGATGAGAGTTCTGATCTACCCTCCCTGACTGTTCCGGCTCACAAGGTTGTTCTGGCGAGTCGCTCCCCAGTGTTCAGAGCAATGCTTGAAAATGATATGGCGGAAAGACGAAGTGGGACCATAAAGATCAGCGATGTATCATACAATGCTCTTCGTGCCTTTGTTGATTATTTATACACTGCAGAAGCATGCCTTGATGACCAAATGGCCTGTGCTCTGTTAGTTTTAGCTGAAAAGTATCAGGTGAAGCATCTCAAGGCGTATTGTGAGAAGTATTTGATGGCGAGATTGAACTGGGAAAAAGCAGTCGCGAATTATGCCTTTGCTCACCAACACCGGGCTACACAATTGCAGGATGCAGCCTTGGCATTAATCACAGACAACATGGACAAGCTTTCTAAGCACGAGGAGTACGAGGATCTGGTTGAGAGTAACCCTCGTATTGTGGTAGATATCTATGAAGCCTATCTCTCAAAACAGGTTAATACTGCAGCCAGCAAGAAATCTTTCAAAAAGAAATAG 1509 0.4718 MKVTWKNTKKRSFPAVSNFSNLPFEHQEEDVTPHQDLARAEIGAPNTDQSEDQDSPNHSDLSEASRLAKEFQAQGDKLAEDGKYGEALGKWESALSLTPEVAVLHEQKAQVLLEIGDAWNALKAAMRVSLLSILNLVYFNXATELQPSWAEAWVTLGRTQLNFGEPDCAIESFDRALSIKPDCADAQEDGKTALRLVKKRKQLHSAGLSNTKSRYAVGDKDGNDLVYMERAKFRTDHQSKFATSGNSKRLFEEMQETDDVNSMQCLSCQDYYVPGDAGTCKECYEEANETEEELKNEIDHLKAKVAFLSLLSPVDHHNRSDTDVILVPSDESSDLPSLTVPAHKVVLASRSPVFRAMLENDMAERRSGTIKISDVSYNALRAFVDYLYTAEACLDDQMACALLVLAEKYQVKHLKAYCEKYLMARLNWEKAVANYAFAHQHRATQLQDAALALITDNMDKLSKHEEYEDLVESNPRIVVDIYEAYLSKQVNTAASKKSFKKK 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0231 502 ProSiteProfiles BTB domain profile. 322 396 IPR000210 GO:0005515
Lele25g0231 502 Pfam BTB/POZ domain 321 423 IPR000210 GO:0005515
Lele25g0231 502 PANTHER OSMOSIS RESPONSIVE FACTOR 1 222 - -
Lele25g0231 502 SUPERFAMILY TPR-like 67 201 IPR011990 GO:0005515
Lele25g0231 502 SMART BTB_4 322 426 IPR000210 GO:0005515
Lele25g0231 502 FunFam BTB/POZ domain-containing protein 428 501 - -
Lele25g0231 502 MobiDBLite consensus disorder prediction 16 66 - -
Lele25g0231 502 Coils Coil 280 311 - -
Lele25g0231 502 Gene3D - 427 502 - -
Lele25g0231 502 ProSiteProfiles TPR repeat profile. 150 183 IPR019734 GO:0005515
Lele25g0231 502 Gene3D Potassium Channel Kv1.1; Chain A 291 426 IPR011333 -
Lele25g0231 502 ProSiteProfiles TPR repeat region circular profile. 150 182 - -
Lele25g0231 502 SMART tpr_5 68 101 IPR019734 GO:0005515
Lele25g0231 502 SMART tpr_5 150 183 IPR019734 GO:0005515
Lele25g0231 502 CDD BTB_POZ_ZBTB_KLHL-like 322 409 - -
Lele25g0231 502 SUPERFAMILY POZ domain 318 423 IPR011333 -
Lele25g0231 502 CDD BACK 435 470 - -
Lele25g0231 502 Gene3D Tetratricopeptide repeat domain 58 216 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0231 Lele-ChrLele25 1348986 1355322 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele25g0231 BTB 2.8e-22 CL0033