Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0223 ATGCTTTTCATTCATTTTCCTATTGTTGAAAATTACAATGTGATTTCTCGTGAAGGAAGTTTTCGCATTTGTGATTTTGGTCTCGCCAAATGGAAGACGGGTGATGAGACTCTGCGAACAAGGATAATGGGCACATTAGGATACCTTGCTCCGGAGTATGCTGAGGATGGCATTGTTTCTGTGAGGACAGATGTGTATGCGCACGGCATCGTTCTGTTACAAGTGATATCAGGACGTAAGTCGGAGCCATTAATTGAGAAGTCGGCTTTAAGTGAACTGGTTGACGCCAGTCATGGGGAATCGTATGACACAAGAGAATTATACCTCATGGCCAAAGCAGCATACTTTTGTGTCCAAAGAGACCCCGGGATGAGATCATCCAGGGGAGAGGGATTACAGGAATCCGAGGGTAATCCTGTTGGTGTTGGCAGTTCTTTTTGCTTTCGATAA 450 0.4467 MLFIHFPIVENYNVISREGSFRICDFGLAKWKTGDETLRTRIMGTLGYLAPEYAEDGIVSVRTDVYAHGIVLLQVISGRKSEPLIEKSALSELVDASHGESYDTRELYLMAKAAYFCVQRDPGMRSSRGEGLQESEGNPVGVGSSFCFR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0223 149 MobiDBLite consensus disorder prediction 126 149 - -
Lele25g0223 149 Gene3D Transferase(Phosphotransferase) domain 1 4 139 - -
Lele25g0223 149 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0223 149 SUPERFAMILY Protein kinase-like (PK-like) 15 132 IPR011009 -
Lele25g0223 149 Pfam Protein kinase domain 14 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0223 149 PANTHER OS01G0750732 PROTEIN 22 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0223 Lele-ChrLele25 1318508 1322294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0223 3 137 Receptor kinase-like Gene Family AT1G53420 35.526 1.11e-20 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele25g0223 Pkinase 4.6e-11 CL0016