Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0216 ATGGAAGATTCTAATTTTGCTGCAACTGCTTCATCGGCAGGCGATCAGGACTCCAAGACTTGTCCTCGCGGTCACTGGAGGCCGGCCGAGGATGAAAAGCTTAGGCAACTTGTTGAACAGTATGGTGCCCAGAACTGGAATTCAATTGCTGAGAAGCTCCAAGGAAGATCAGGGAAAAGTTGCAGATTAAGGTGGTTTAATCAGCTTGATCCGAGGATTAACAGGAGGCCATTTACAGAAAAAGAGGAAGAGAGGTTACTGGCAGCTCACCGCATTCATGGGAACAAGTGGGCACTGATAGCGAGGCTTTTTCCTGGTCGAACTGATAACGCCGTGAAGAATCACTGGCATGTTATTATGGCACGAAAGCAAAGAGAGCAATCCAAGCAGTTAAGTGGCAAGAGGGTCTTCCAAGGTGTTTACAATGATTCTTCAAGTAACACTTCCTCTTCTAATAAAAGATCAAAATCTCAAGATTTCTCCCAAACCTTCTTTGACTTCCGGAACATCGACAAAAGTAGAATCATTGCAGAATATTCTCCCTCCATCTCTTTGGCTTCTTGGAATTTCTCATCCACAGCGAAACAAGGAAAAGATAATAGTTACTTCAACCCCTGCTTTAACATTTACTTCTCAGAATGTTCAAAAGGTTCGGATAAATATCTCTACAGATTTTTTCCAAATTCTGCATCATCGTACGGCAGCATTCTACCAAACTACAAGAAGGTTGTTCCTGGTCCTTACGGATCATCAGGCTTAGGTTGTGATGGTGACGATGATAGAAATAGGACAATAAATAAGGACTTGACGAATCTAAGCAACATCTCACCCACATTTGCAAAGAAGAGGGCTTCTGTGGAGCAAGAGCAAGCAGATAATCAGAAAGAAGTTCCCTTCATTGATTTTCTGGGCGTGGGAGTGTCATCCTCGTGA 933 0.433 MEDSNFAATASSAGDQDSKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEKEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKQLSGKRVFQGVYNDSSSNTSSSNKRSKSQDFSQTFFDFRNIDKSRIIAEYSPSISLASWNFSSTAKQGKDNSYFNPCFNIYFSECSKGSDKYLYRFFPNSASSYGSILPNYKKVVPGPYGSSGLGCDGDDDRNRTINKDLTNLSNISPTFAKKRASVEQEQADNQKEVPFIDFLGVGVSSS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0216 310 Gene3D - 23 74 - -
Lele25g0216 310 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Lele25g0216 310 Pfam Myb-like DNA-binding domain 26 86 - -
Lele25g0216 310 PANTHER MYB PROTEIN-RELATED 23 156 - -
Lele25g0216 310 MobiDBLite consensus disorder prediction 1 18 - -
Lele25g0216 310 MobiDBLite consensus disorder prediction 1 27 - -
Lele25g0216 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Lele25g0216 310 SMART sant 22 71 IPR001005 -
Lele25g0216 310 SMART sant 74 122 IPR001005 -
Lele25g0216 310 ProSiteProfiles Myb-like domain profile. 23 69 IPR001005 -
Lele25g0216 310 SUPERFAMILY Homeodomain-like 22 116 IPR009057 -
Lele25g0216 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 69 IPR017930 -
Lele25g0216 310 FunFam MYB transcription factor 76 153 - -
Lele25g0216 310 Gene3D - 77 136 - -
Lele25g0216 310 CDD SANT 77 117 IPR001005 -
Lele25g0216 310 FunFam MYB transcription factor 23 74 - -
Lele25g0216 310 CDD SANT 26 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0216 Lele-ChrLele25 1290313 1291521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0216 20 129 MYB Transcription Factor Family AT1G17950 82.727 6.66e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele25g0216 Myb_DNA-bind_6 4.9e-17 CL0123