Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0215 ATGTCGTTAGTTAGATCTGCAGAGCTGCCTGCTACACGTTATGGAAATGCCAAGCTCTACTCAATCAAGGGAACTGATGTTAGGCCTGGCTTTCCCTCCCAAATTTTTGGTCCTGATAAGCACAGAACCATGTACATAACAGATTCTTACTCCAGTGAGAGTTATGAGAAGTACTTTCACAATTCACCAACTGAAGAACTGATAGAAACTCCTACTTCCAGCATCTCAGGAAGCTCCCTGCCCGATGGCTCATCCTATCCGGTTAGAGCTAGTTCAGGAGCTTCTGTGGCTACTACCAACCCATTTGATATTTCTTTCGTGTCCACGAGACATGGTGATGCCTGTTGGTCCAACTTTGGATCAGATTTCTTGGAAAATGGGAGCCCAGATCCACTTGACTTTGATGATCAAATGAAATTAAAACTCCAAGAATTAGAGAGGACACTGCTTGGTGATAACAACGATGATTATGAGGAGGATTTCATACTTGGGACTTTTCAAAGCATGGATATTGATGCTGAGTGGGTGGAACCCATTCAGAATATGCTGCACCATGGTTCACCAAAGGAGTCTTCATCGTCAGATTCTAACCATAGTAGCATTAGTAGTATCTCTCCTCGGACCCCAAAGCAATTGCTGTTAGATTGTGCCGGTGTGATTTCAGAAGGAAATGCAGAGGAAGCGTCGTCGTTGATAAATGAACTCCGGCAGATGGTATCAATTCAGGGAGATCCTCCCCAGAGGATTGCAGCCTATATGGTGGAAGGGCTTGCAGCTCGAATAGCTGAATCTGGCAGCAGTATTTATAAAGCACTCAAGTGCAAGGAACCTCCTTCCTCAGACCGACTGGCGGCGATGCAAATACTGTTTGAGGTGTGCCCATGTTTTAAATTTGGATTTATTGCCGCAAATGGTGCAATTACGGAGGCAGTTCAAGATGAGAAGAAGGTTCACATAGTAGATTTTGACATCAATCAAGGAAATCAATACATAACTCTGATACAAGCACTTGCTTCAAGGCCGGGTAAGCCACCACATGTGAGATTAACCGGGGTTGATGATCCTGAGTCTGTCCAGCGATCTGTTGGAGGCCTAAAAATCATTGGACAAAGACTTGAAAAACTAGCAGAAATACTTGGATTGCCGTTTGAATTTCGAGCAGTGGCATCGAGGTCTTCCCTTGTCACTCCATCAATGCTCGATTGTCGTCCTGGGGAAGCACTCGTGGTGAATTTTGCATTTCTGCTTCATCACATGCAAGATGAGAGTGTTTCAACGGTAAATGAACGAGACCAACTACTTCGCATGGTGAAGAGCCTGAATCCAAAACTTGTCACCGTTGTTGAACAAGATATGAACACCAACACCCTTCCGTTTTTCCCAAGATTTGTTGAAGCCTACAATTACTACTCAGCCGTGTTTGAGTCGCTGGACGCGACTCTTCCCAGAGATAGTCAGGATAGGATGAATGTTGAAAGGCAATGCCTGGCAAGAGACATTGTCAATATTGTTGCGTGCGAAGGTGAGGATAGGATTGAACGTTATGAAGTTGCTGGAAAATGGCGGGCAAGGATGATAATGGCCGGCTTCACTACATCCCCGATGAGTGCCAATGTGACCGACGCAATTAAGGAACTCATTAAGCAGTATTGTGACAAGTACAAGATGAACGACGTGATGGCGGCACTTCATTTTGGGTGGGAAGACAAGAACTTGATTGTTGCTTCAGCATGGAGGTGA 1740 0.45 MSLVRSAELPATRYGNAKLYSIKGTDVRPGFPSQIFGPDKHRTMYITDSYSSESYEKYFHNSPTEELIETPTSSISGSSLPDGSSYPVRASSGASVATTNPFDISFVSTRHGDACWSNFGSDFLENGSPDPLDFDDQMKLKLQELERTLLGDNNDDYEEDFILGTFQSMDIDAEWVEPIQNMLHHGSPKESSSSDSNHSSISSISPRTPKQLLLDCAGVISEGNAEEASSLINELRQMVSIQGDPPQRIAAYMVEGLAARIAESGSSIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVQDEKKVHIVDFDINQGNQYITLIQALASRPGKPPHVRLTGVDDPESVQRSVGGLKIIGQRLEKLAEILGLPFEFRAVASRSSLVTPSMLDCRPGEALVVNFAFLLHHMQDESVSTVNERDQLLRMVKSLNPKLVTVVEQDMNTNTLPFFPRFVEAYNYYSAVFESLDATLPRDSQDRMNVERQCLARDIVNIVACEGEDRIERYEVAGKWRARMIMAGFTTSPMSANVTDAIKELIKQYCDKYKMNDVMAALHFGWEDKNLIVASAWR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0215 579 MobiDBLite consensus disorder prediction 185 205 - -
Lele25g0215 579 MobiDBLite consensus disorder prediction 69 95 - -
Lele25g0215 579 ProSiteProfiles GRAS family profile. 200 579 IPR005202 -
Lele25g0215 579 Pfam GRAS domain family 210 579 IPR005202 -
Lele25g0215 579 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 191 574 IPR005202 -
Lele25g0215 579 MobiDBLite consensus disorder prediction 183 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0215 Lele-ChrLele25 1275162 1276901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0215 1 579 GRAS Transcription Factor Family AT1G21450 62.162 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele25g0215 GRAS 2.8e-135 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0215 25 1275162 1276901 Lele01g0248 01 1406450 1408072 CCT
Lele25g0215 25 1275162 1276901 Lele02g0240 02 1361568 1363193 CCT
Lele25g0215 25 1275162 1276901 Lele03g0255 03 1388441 1391637 CCT
Lele25g0215 25 1275162 1276901 Lele04g0246 04 1462350 1463975 CCT
Lele25g0215 25 1275162 1276901 Lele27g1870 27 23458958 23460697 hybridization
Lele25g0215 25 1275162 1276901 Lele28g0236 28 1376530 1378269 hybridization