Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0211 ATGCAGAGTTGCCGCTACCTCACCTCCCAAGCATGGGCCCCGACTAGCCTACATCGGACAAACCGCCACCCCCGATTACCGACACACACCGTCAGGCTCCGATCACCACCCCCGATCTCCGCCGTGGCCGCTCCACTCAAAAATCGAAAGGCTCACTCCATGCCGCCGGAGAAGGCCGAAGTTTTCAAGTCACTGGAACGCTGGGCTTCGGATGGGCTGCTGCCGCTGCTGAAGCCGGTGGACCAGAGCTGGCAGCCGCAGAACTTCGTGCCCGACTCATCGTTGCCGTTCGATGAATTCATGGATCAAGTGAAGGCTCTGCGCGATCGGACGGCCGAGCTCCCGGATGAGTACTTCGTGGTACTGGTGGGTGATATGATCACGGAGGATGCATTGCCTACATATCAGAGCATGATAAACAACCTGGATGCGGTGGGGGACGAGACCGGAGCAAGCCCGGATCCGTGGGCCGTTTGGACCCGTTCTTGGACTGCGGAGGAGAATAGGCATGGGGATTTGCTAAGGACCTATCTCTATCTATCCGGTCGGGTTGATATGCTCATGGTCGAGAAGACCGTACAGTATTTGATTGGGGCTGGAATGGATCCGGGGACAGAAAACAACCCATATTTGGGATTCGTTTACACCTCGTTTCAAGAGCGAGCCACATTCGTATCACACGGCAACACGGCTCGCTTAGCGAAGGAGGGCGGAGATCCGGTGCTGGCGCGCATATGTGGCACCATCGCCGCGGACGAGAAACGGCACGAGAATGCGTACGCGAGGATCGTCGAGAAGCTGCTGGAAGTGGACCCCACGGGAGCGATGCTGGCCATCGCAGACATGATGCACAAGAAGATCACCATGCCCGCCCATTTGATGTACGACGGGAAGGACCCACGCCTGTTCGAGCATTTCTCTGCGGTGGCGCAGCGGATGGGGGTGTACACGGCGAACGATTACGCGGACATATTGGAGTTTTTGATCGGGAGATGGAAGTTGGAGAAGCTGGAGGGGCTGACGGGCGAAGGGAAGCGTGCACGGGATTTCGTGTGTGGACTAGCGCCGAGGATTAGGAAGTTGCAAGAGCGAGCAGACGAGCGAGCGCGCAAGATGGGGGCCCATGGCGTCAAATTCAGCTGGATCTTCAACAAAGAGGTGGCCTTGACCATGTAA 1176 0.5774 MQSCRYLTSQAWAPTSLHRTNRHPRLPTHTVRLRSPPPISAVAAPLKNRKAHSMPPEKAEVFKSLERWASDGLLPLLKPVDQSWQPQNFVPDSSLPFDEFMDQVKALRDRTAELPDEYFVVLVGDMITEDALPTYQSMINNLDAVGDETGASPDPWAVWTRSWTAEENRHGDLLRTYLYLSGRVDMLMVEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYARIVEKLLEVDPTGAMLAIADMMHKKITMPAHLMYDGKDPRLFEHFSAVAQRMGVYTANDYADILEFLIGRWKLEKLEGLTGEGKRARDFVCGLAPRIRKLQERADERARKMGAHGVKFSWIFNKEVALTM 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0211 391 CDD Acyl_ACP_Desat 57 365 IPR005067 GO:0006631|GO:0045300
Lele25g0211 391 Pfam Fatty acid desaturase 57 383 IPR005067 GO:0006631|GO:0045300
Lele25g0211 391 PIRSF Dlt9_acylACP_des 12 389 IPR005067 GO:0006631|GO:0045300
Lele25g0211 391 SUPERFAMILY Ferritin-like 47 387 IPR009078 -
Lele25g0211 391 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 41 389 - -
Lele25g0211 391 Gene3D Ribonucleotide Reductase, subunit A 42 389 IPR012348 GO:0016491
Lele25g0211 391 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 47 387 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0211 Lele-ChrLele25 1256372 1257877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0211 32 389 Acyl Lipid Metabolism Gene Families AT1G43800 78.022 0.0 598