Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0208 ATGAGACGCTTGACAGAGGATCAGCTTCTTCAAATGATTAGAGATTACACTGAATCTGATTCCGAAGCAGCGTTTACTTCCAATTCCCTCTCTGAAATTCACGACCCCATATCCCTATGCATCCCCTTGCAGGAAATACTATGGGATGTCACAGATATTGAAGTGGAGATTCTCGGGAAGATTCTGAGGTATGCAAATGACAAAGAATATGATAGCGCTGTTCACTTGAAGAAGCTGGTGGTGATGAAACTCAGAATGGATGGCTATGGAGCTTCTCTTTGCCAAACTTCCTGGTTGTCTAGAATCGATCGTCCTAAAGGCAAAGCAACGAGGCTGATAGTGGATATGGACTTCAGGTCACAGTTTGAGGTGGCAAAACCAACGAGAGCATACAAAGACCTCACCGACATGCTTCCTTCGATTTTCGTTGGGACTGAAGAAAGATTGATCGAGATAATAGCTCTGCTTTGTTCAGCTGCTAAGAAATCGCTGAAAGAGAGAGGCTTTCACGTTCCTCCATGGAGAAAAGCCACTTACATGAAATCCAAGTGGCTTTCCAGAGACTGCAAGAAGATCTCCTTCACGCCCGGTTTAGAGCTAGGAAATGGAGGGCTAGCTAAAAAAACTCTCTCTCTAGGTGCAAAGTTTTGTCCTTTGCATCTTCCTGTGCGATTGGGTGAAGATACTAACAAGAGAAGATCTCAAAGAAGTAGATACTTCAACGATGTTGAGAAGGCATTACATGCTCCATTTCAGGATAGGAGTATAAATTGCAAGCCCACCTGGAAAGTGGTGATGGTTGTTATTTTATTAGGAACCCTAGTCACAATTTTCCATCCTCCAGCAATTTATGACACTGATCCTCTGTCAAACTCCATGTCGAGGCCAACTTTTGTTGACAAATGGAAAAGAGAGTTTGATACTACTGATCAGCGTTATGCTTCTCTTCTAAATGTTGAGTGGGGCCAAATATCAAAAGTTCTTGCAAAATTGACGGATATGAACACATATCAGGGAGTTGGTTTGTTTAACTTTAATGAAAGTGAGATTGACCACTGGAAACAGCTAATACCAGATGCTGAGCACATAGTTCTTCGTCTGAACTATGCTTCAAGTAACATAACATGGGAAGTCCTGTACCCTGAATGGATTGATGAAGAAGAAGAATTTGAAGTTCCTGTTTGTCCTACACTACCAAAAATTCAAGTTCCTGGAAAACCGAGGCTTGATCTTGTTGCTGCCAAACTTCCCTGCAACAAGTCAGGGAGATGGTCAAGAGATGTGGCTCGTTTGCACCTGCAACTTGAGGCAGCAAGGCTTGCAGCCTCTTCCAAAGGGCATCACCCAGTGCGTGTGCTTTTTGTCACTGACTGTTTCCCTACCCCAAATCTCTTTACATGCAAGGAACTCATTCGACGTGAAGGTAATGCATGGCTTTATGAACCTAAGCTACATAGTCTGAAAGCTAAGCTACGACTGCCAGTTGGATCATGTGAACTATCAGTTCCTCTTACCGCTAAAGAAAATTTTTACTCGGAAAGGGCACACCGGGAAGCTTATGCAACCATCCTGCATTCTGCACATGTATATGTTTGTGGAGCCATTGTTGCTGCTCAGAGTATTCGCATGGCTGGTTCAACAAGAGATCTTGTGATTTTAGTGGATGAGTCCATTAGCGACTATCATCGGGGGGGCCTGGAGGCTGCTGGATGGAAGATTCATACTATCAAAAGAATTAGGAACCCAAAAGCTGAGCCACAGGCATACAATGAGTGGAATTATAGCAAATTCCGGCTTTGGCAGCTAACAGAATATGACAAAATTATTTTCATCGATGCTGACCTGCTCATACTGAGGAATATCGATTTCCTCTTTGAGATGCCTGAGATATCAGCCATAGGAAATAATGCCACCCTTTTCAACTCGGGAGTAATGGTAATTGAACCATCACAATGTACATTTCAGTTGCTAATGGATCACATTAATGACATCGTCTCCTACAATGGTGGGGACCAGGGTTATCTCAATGAAATATTCACATGGTGGCATCGCATTCCAAAACACATGAACTTTTTGAAGCACTTCTGGGAAGGCGATGAGGAGGAGAAAAAGGAGATGAAAACCCGTCTCTTCGGAGCTGATCCTCCAATTCTTTATGTCCTCCATTATTTGGGTAATAAACCCTGGCTTTGCTTCCGAGATTACGACTGCAACTGGAATGTGGACATTCTGCGGGAGTTTGCCAGTGACGTGGCTCATGCGACATGGTGGAAGGTGCATGACGCCATGCCAGAGAAGTTACAGAAGTTCTGTTTGCTGAGGTCCAAGCAGAAGGCACAATTAGAGTGGGATCGCAGACAAGCAGAGAAAGGGAACTATTCTGATGGTCACTGGAAAATTAAGATAAAAGACAAGCGTTTAAAAACATGCTTTGAGGATTTCTGCTTCTGGGAGAGCATGTTATGGCACTGGGGCGAAAAGAATTGGACAGATAATTCGACAGCTACAAATTCACTACCTGCCATCGCTACCAAATCTCTATCTTCCTCATAG 2553 0.4356 MRRLTEDQLLQMIRDYTESDSEAAFTSNSLSEIHDPISLCIPLQEILWDVTDIEVEILGKILRYANDKEYDSAVHLKKLVVMKLRMDGYGASLCQTSWLSRIDRPKGKATRLIVDMDFRSQFEVAKPTRAYKDLTDMLPSIFVGTEERLIEIIALLCSAAKKSLKERGFHVPPWRKATYMKSKWLSRDCKKISFTPGLELGNGGLAKKTLSLGAKFCPLHLPVRLGEDTNKRRSQRSRYFNDVEKALHAPFQDRSINCKPTWKVVMVVILLGTLVTIFHPPAIYDTDPLSNSMSRPTFVDKWKREFDTTDQRYASLLNVEWGQISKVLAKLTDMNTYQGVGLFNFNESEIDHWKQLIPDAEHIVLRLNYASSNITWEVLYPEWIDEEEEFEVPVCPTLPKIQVPGKPRLDLVAAKLPCNKSGRWSRDVARLHLQLEAARLAASSKGHHPVRVLFVTDCFPTPNLFTCKELIRREGNAWLYEPKLHSLKAKLRLPVGSCELSVPLTAKENFYSERAHREAYATILHSAHVYVCGAIVAAQSIRMAGSTRDLVILVDESISDYHRGGLEAAGWKIHTIKRIRNPKAEPQAYNEWNYSKFRLWQLTEYDKIIFIDADLLILRNIDFLFEMPEISAIGNNATLFNSGVMVIEPSQCTFQLLMDHINDIVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEEEKKEMKTRLFGADPPILYVLHYLGNKPWLCFRDYDCNWNVDILREFASDVAHATWWKVHDAMPEKLQKFCLLRSKQKAQLEWDRRQAEKGNYSDGHWKIKIKDKRLKTCFEDFCFWESMLWHWGEKNWTDNSTATNSLPAIATKSLSSS 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0208 850 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 515 766 IPR029044 -
Lele25g0208 850 CDD GT8_Glycogenin 518 763 - -
Lele25g0208 850 PANTHER GLYCOGENIN SUBFAMILY MEMBER 426 810 - -
Lele25g0208 850 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 78 190 IPR006502 -
Lele25g0208 850 SUPERFAMILY Nucleotide-diphospho-sugar transferases 518 768 IPR029044 -
Lele25g0208 850 FunFam Hexosyltransferase 515 767 - -
Lele25g0208 850 Pfam PDDEXK-like family of unknown function 55 187 IPR006502 -
Lele25g0208 850 Pfam Glycosyl transferase family 8 524 730 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0208 Lele-ChrLele25 1240105 1247600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0208 226 826 Glycosyltransferase AT1G77130 69.852 0.0 877
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0208 25 1240105 1247600 Lele27g1877 27 23491595 23495325 hybridization
Lele25g0208 25 1240105 1247600 Lele28g0228 28 1322606 1328160 hybridization