Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0198 ATGCAGGGAAGCTTGCGGGAGGTCGCAGCAAGAGCAGCTAAAGGTGGAAAAGCAACGAGCAGAGATAGAAAAATGGCTCTGCGACAAGATGTTGATAAGTTGAAGAAGAAGCTCAGGCATGAAGAGAATATCCACAGGGCACTGGAGAGGGCTTTAAACCGGCCGTTGGGAGCTCTGCCTCGTCTTCCTCCTTTTCTCCCCCCTTACATACTAGGGCTGCTGGCGGAAGTTGCGGTTGTGGAAGAGGAAATAGTAAGGCTTGAAGAGCAGGTCGTGGATTTGAGGCAGGACATGTACGAGGAAGCCGTGTACATGTCATCTTCTAGAAGAAGAATGGAGCAGTTAGCTCATTTTAACAATGCAAATTCGATTGGAATTTCATTCAGAGAATGTAATCCTCCTGGATTCTCCTTCTTGATTGTCTGTCCAGAGGATAAACACGGAAAAGAAAACCAATCTTGTTCTAATTCTTCCAAGAGCAGCAATAAATCGAAACGTCCAAGCCAAACGACCAAGACTGCAATTACAAAGCTTCCCGTTGACAATAAATCAGTGAAGAAACATAGAGGTCCTCCAGTGAGGCAGCCACAAGTAAGGCTGAACGACTATCCAATTGCGGAAATGATAAATCCGAGTGCACATGAAAAACCGACCGGAGATGAAAGCCCGAATACAATATCCGAAAATATTGTTAAGTGTTTATCAAGCATTCTCTTGAGAATGAGTTCAGTGAAGAATACTGGGGCTGCAGATGATACCCCATCCTTAAGGATTCGGAAAACTCGAAACTCTGTTGAAGGAGCAGAGTCTTGGGATCCTTATGGTATCTGTTCCCAGTTTGGAAAGAGGGAAATTGGTCCTTACAAGCAATTATGTGCCATTGAAGCTAAATCTTTCAATCCAAAAAGAACTGCAAATTCTCAGTTTTTACTGAGTCGATTGAAACTTCTTCTTAGGAAACTTGCCTCTGTCAGCTTGGAGAACCTCAACTATCAGGAGAAGCTTGCATTCTGGATCAACATTTATAATTCCTGCATGATACATGCATTCATAGAGAATGGCGTCCCAGAGAGTCCTGAAATGGCGGTTGCGCTGATGCGGAAGGTGAGAGTGTACACGGCATCTGAGGTTGAGAAGGAATTGGAAGCGGCAAAAAGAGAGTATTTACAAGCAGCTATTGGAATTTCGACATCCAAATTTGCAATCCCAAAACTGCTGAGTTGGTATTTGCTGGACTTTGCAAAAGACTTGGAGTCGTTGCTGGATTGGATTTGCCTGCAGTTGCCAAGTGAACTTGGGAAAGAAGCCATTCGTTTCCTTGAGGAAAGAAAAAACCAGCCACTCTCTCAATTTGTACAGATTCTTCCTTATGAGTTTACTTTTAGATACCTGATATGCACATAA 1404 0.4359 MQGSLREVAARAAKGGKATSRDRKMALRQDVDKLKKKLRHEENIHRALERALNRPLGALPRLPPFLPPYILGLLAEVAVVEEEIVRLEEQVVDLRQDMYEEAVYMSSSRRRMEQLAHFNNANSIGISFRECNPPGFSFLIVCPEDKHGKENQSCSNSSKSSNKSKRPSQTTKTAITKLPVDNKSVKKHRGPPVRQPQVRLNDYPIAEMINPSAHEKPTGDESPNTISENIVKCLSSILLRMSSVKNTGAADDTPSLRIRKTRNSVEGAESWDPYGICSQFGKREIGPYKQLCAIEAKSFNPKRTANSQFLLSRLKLLLRKLASVSLENLNYQEKLAFWINIYNSCMIHAFIENGVPESPEMAVALMRKVRVYTASEVEKELEAAKREYLQAAIGISTSKFAIPKLLSWYLLDFAKDLESLLDWICLQLPSELGKEAIRFLEERKNQPLSQFVQILPYEFTFRYLICT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0198 467 MobiDBLite consensus disorder prediction 153 178 - -
Lele25g0198 467 Coils Coil 17 51 - -
Lele25g0198 467 MobiDBLite consensus disorder prediction 149 196 - -
Lele25g0198 467 Pfam Leucine-zipper of ternary complex factor MIP1 21 101 IPR025757 -
Lele25g0198 467 PANTHER EXPRESSED PROTEIN 12 368 - -
Lele25g0198 467 MobiDBLite consensus disorder prediction 1 25 - -
Lele25g0198 467 Pfam Protein of unknown function, DUF547 327 369 IPR006869 -
Lele25g0198 467 Coils Coil 70 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0198 Lele-ChrLele25 1160145 1163074 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0198 25 1160145 1163074 Lele02g0859 02 5210313 5217114 CCT
Lele25g0198 25 1160145 1163074 Lele03g0873 03 5081525 5084711 CCT
Lele02g0874 02 5309448 5311604 Lele25g0198 25 1160145 1163074 CCT
Lele03g0891 03 5172576 5174746 Lele25g0198 25 1160145 1163074 CCT
Lele04g0888 04 5469363 5471543 Lele25g0198 25 1160145 1163074 CCT
Lele25g0198 25 1160145 1163074 Lele27g1889 27 23568000 23570932 hybridization