Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0191 ATGAAGACTCCCACCACTCACCCCGTTTCCCAACCTCCTCAAATGCCTTTGTTTCGCAAATCATCATCTTCCCCCTCTCATACCCCCTCCACGCCTTCATCTATTTCTCCTCCTGCCCTCAAACAAACTGACGTTGATGCCGCTGGCAATGCCGCTAGTCCCGTTCACAGCTCGGAGCAATCCACTCCCCGCCGCCGCCTTACTCGAGCCAGGAAGCTTCGCTACCTCACCGACCATGATGTTGGCTTGCACCTCACTGACGATTCTTCGCTCCCGCCTTCCCCTCGGTCCTCTCGCAAGTCTCGCTCATCGGGGGGTTCCGAACACTGGTCCTCCTCCGCTGTGCCTCAACCCCTGCCGCTTCCCGAATCACCGTTGACTCGCCGACCGGAGTCAACCGGTCCTAATTCCGGACAGTTCCATCTCGGATCTCCTTCCGTAGACCATTCGGGATTTGCTTTCGGGAGGAAGACGGTGGATCCCGATGCATTAATAAACATGAAGTCTTGGAGCCATATGAATAGATCTTGTGATCCAACCTCTGTGAACGCGAAATTTAATTTGAGAGTAAACATCCCAGTTGCAAGTTTCTGGACAGGTCAAAATTCATGTAAAGATGGAGCAATCTCTCATGATATTGACTCTGAAAGTATTTATGACTCAAGATTGCGTGTGGCCCCAAAGAGTGCGCCAACAAGTGTTTTTTCCAGTCCTGTTACCAGTCCGCGTAGATCAAGCAATGTAGATTTCACTGATCATTTCATTAGTACTCAAGAATTTCATGACAACCCTGTTGGCCATCCTTTGAAAGTGTCACCACACCTGAATGTTCAAAGTCCAGATCGTTCTTCTCTCCGTAGCCCAGGGCGCCATAGTCCTTTCCTCAATCTCAACATCCAAGATGGATCTCAGCATAGATTTCATTCCATGGCATGGCCAGAAAATAACCATGCCTATGCACATCCTTTGCCTCTCCCTCTTCCGCCTGGAGCTTCACCACCAGCACAATCATCTGTGCAGTGTCAATCAAGTGCCATGAATCACTCATTTGAAAGTCAATTTGCAGTGAAAGGTCAATGGCAGAAAGGAAAACTTATTGGACGGGGCACTTTTGGAAGCGTTTATCATGCAACAAACCTAGAGACGGGTGCTTCATGTGCATTGAAGGAGGTGGATATCATTCGAGATGACCCTAACTCTGCGAACTGTATAAAGCAACTAGAGCAGGAAATCAAGATTCTTCGTCAACTACACCATCCAAATATCGTTCAGTATTATGGCAGTGAAATAGTTGGTGATCACTTGTGCATATATATGGAGTATGTTCATCCAGGGTCAGTTGATAAATTTGTGCGGGCAAATGGTGAAGCAATGACAGAGTCTGTAGTTCGCAATTTTACAAGACATATTCTCTCAGGGTTGGCCTACCTGCATAGTACCAAAACTATCCACAGGGACATCAAAGGAGCAAACTTACTTGTTGATGCATCAGGCACTGTCAAGCTTGCTGATTTTGGAATGGCAAAAGTTCTAACAGGGAAATCATTTGCCCTTTCTTTAAAGGGCAGTCCATACTGGATGGCTCCTGAGGTCATGAAGGCTGCCATGATGAAAGATGACAATCCTGACCTTGTCTATGCTGTCGATATCTGGAGCTTAGGTTGCACTATCATAGAGATGCTGACAGGAAAACCTCCCTGGAGTGACTTTGAAGGGCCTCAGGCCATGTTCAAGGTACTGTACAATTCGCCACCGATACCAGAAACATTATCTTCAGCAGGAAAGGATTTTCTTCTGAGATGTTTTGAAAGGGATCCTGCAAATCGACCATCAGCAGCAAGGCTTCTTGAGCACGCCTTTGTGCAAAATTTGCATGATCAAGATGCTTTAGCTCGCCCACAATCATATGCTAGAGAAGACCCTGAAGATAATTCACGTAGTCCCAAAGACACTGCTACACAGAACCGTGACGTAATTCGAGCCTCCATGGGCACCCGGTTCATCAACAAAATCCAGAAATTGATCGGTGATTCTTCCCAACGATATAATGCTAAGGATTCTAAATATTCTACATCTCATTACCCTCCTTACTCTCTGCCAGAAGTTAAAATTCCTCAGTCGTCCTTGAGACCAGCTGCCCTCAATTACGTTTCTGCTTCAAAATCCAGCAACATGTCCCTCGCTGTAATGAGATTCGTCACGCACCTTTGA 2211 0.4677 MKTPTTHPVSQPPQMPLFRKSSSSPSHTPSTPSSISPPALKQTDVDAAGNAASPVHSSEQSTPRRRLTRARKLRYLTDHDVGLHLTDDSSLPPSPRSSRKSRSSGGSEHWSSSAVPQPLPLPESPLTRRPESTGPNSGQFHLGSPSVDHSGFAFGRKTVDPDALINMKSWSHMNRSCDPTSVNAKFNLRVNIPVASFWTGQNSCKDGAISHDIDSESIYDSRLRVAPKSAPTSVFSSPVTSPRRSSNVDFTDHFISTQEFHDNPVGHPLKVSPHLNVQSPDRSSLRSPGRHSPFLNLNIQDGSQHRFHSMAWPENNHAYAHPLPLPLPPGASPPAQSSVQCQSSAMNHSFESQFAVKGQWQKGKLIGRGTFGSVYHATNLETGASCALKEVDIIRDDPNSANCIKQLEQEIKILRQLHHPNIVQYYGSEIVGDHLCIYMEYVHPGSVDKFVRANGEAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGTVKLADFGMAKVLTGKSFALSLKGSPYWMAPEVMKAAMMKDDNPDLVYAVDIWSLGCTIIEMLTGKPPWSDFEGPQAMFKVLYNSPPIPETLSSAGKDFLLRCFERDPANRPSAARLLEHAFVQNLHDQDALARPQSYAREDPEDNSRSPKDTATQNRDVIRASMGTRFINKIQKLIGDSSQRYNAKDSKYSTSHYPPYSLPEVKIPQSSLRPAALNYVSASKSSNMSLAVMRFVTHL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0191 736 Gene3D Transferase(Phosphotransferase) domain 1 357 660 - -
Lele25g0191 736 ProSiteProfiles Protein kinase domain profile. 360 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0191 736 MobiDBLite consensus disorder prediction 634 656 - -
Lele25g0191 736 SMART serkin_6 360 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0191 736 FunFam Predicted protein 356 642 - -
Lele25g0191 736 MobiDBLite consensus disorder prediction 276 291 - -
Lele25g0191 736 ProSitePatterns Protein kinases ATP-binding region signature. 366 389 IPR017441 GO:0005524
Lele25g0191 736 Pfam Protein kinase domain 361 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0191 736 MobiDBLite consensus disorder prediction 129 144 - -
Lele25g0191 736 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 37 634 - -
Lele25g0191 736 MobiDBLite consensus disorder prediction 634 650 - -
Lele25g0191 736 MobiDBLite consensus disorder prediction 1 69 - -
Lele25g0191 736 SUPERFAMILY Protein kinase-like (PK-like) 339 651 IPR011009 -
Lele25g0191 736 MobiDBLite consensus disorder prediction 83 147 - -
Lele25g0191 736 MobiDBLite consensus disorder prediction 271 291 - -
Lele25g0191 736 MobiDBLite consensus disorder prediction 15 40 - -
Lele25g0191 736 MobiDBLite consensus disorder prediction 90 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0191 Lele-ChrLele25 1136985 1141998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0191 64 623 MAP Kinase Kinase Kinase AT5G66850 46.555 1.21e-146 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele25g0191 Pkinase 8e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0945 01 5453411 5455573 Lele25g0191 25 1136985 1141998 CCT
Lele02g0947 02 5740719 5742932 Lele25g0191 25 1136985 1141998 CCT
Lele03g0942 03 5470399 5472958 Lele25g0191 25 1136985 1141998 CCT
Lele04g0939 04 5783040 5785213 Lele25g0191 25 1136985 1141998 CCT
Lele25g0191 25 1136985 1141998 Lele27g1892 27 23590018 23594958 hybridization
Lele25g0191 25 1136985 1141998 Lele28g0204 28 1195792 1200496 hybridization