Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0186 ATGGCTGTCCGGGTCACTTTTAGCTATTCTGCCTATGTCGCCCGAAACTTGGTTTCGTCCGCCGTTACTCGAGTCGCCTCTACCCGTTGCTGCCAGGAATGCAGGTTCCGGTCTCGCATAGTTTGTCCTGGCCAACAGATTCATGATGTTCATTCCTCCTCCCCTTGCGGCGTGCGTAGTTACCATTTCGATTACAGGCGGCCCGAATCCAAGTGCTGCGTAGAGAATTCAGCATCTACGTATACGACTCTCGCAGCAGGAATTCTGGTCGATTCCCTTATCACAAGCTGTGTGGTGGATAAAGGCGGAGCTCACGGATTTGGCGGGGAAGATAACGAGTCGGGGTACAGTTCCAAGGATATTGAGAAGACAAGCTGGCTTTCTCGCCTTTTACGACTCTATTCAGAGGATGCGAAAGCTGTGTTTACTGCCGCTAGTGTTAATATTCTCTTCCGATCTTTCTTGGCTGAACCGAGATCGATTCCCTCGTCCTCAATGTACCCAACTCTGAATGTAGGTGACCGTATTTTGGCGGAAAAGGTTTCCTTCTTCTTTAGAAGGCCTGATGTTTCAGATATAGTAATTTTCAAGGCGCCTCCGATTTTGCAGGAAATCGGTTATAATTCAGGTGATGAATTTATAAAAAGAATTGTGGCGAAGGCTGGGGACTATGTTCAGGTTCTTGATGGAAAGTTGCTGGTGAATGGTATTGCTCAGGAAGAAGAGTTCATTTTGGAGTCACTCGCTTATGAGATGGATCCGCTGGTTGTGCCTGAAGGTTATGTCTTTGTGATGGGAGACAATCGCAATAACAGCTTTGATTCGCATAACTGGTAA 837 0.4731 MAVRVTFSYSAYVARNLVSSAVTRVASTRCCQECRFRSRIVCPGQQIHDVHSSSPCGVRSYHFDYRRPESKCCVENSASTYTTLAAGILVDSLITSCVVDKGGAHGFGGEDNESGYSSKDIEKTSWLSRLLRLYSEDAKAVFTAASVNILFRSFLAEPRSIPSSSMYPTLNVGDRILAEKVSFFFRRPDVSDIVIFKAPPILQEIGYNSGDEFIKRIVAKAGDYVQVLDGKLLVNGIAQEEEFILESLAYEMDPLVVPEGYVFVMGDNRNNSFDSHNW 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0186 278 SUPERFAMILY LexA/Signal peptidase 152 278 IPR036286 -
Lele25g0186 278 FunFam Peptidase/ serine-type peptidase 163 278 - -
Lele25g0186 278 ProSitePatterns Signal peptidases I serine active site. 163 170 IPR019756 GO:0004252|GO:0016020
Lele25g0186 278 PRINTS Bacterial leader peptidase 1 (S26A) family signature 257 276 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele25g0186 278 PRINTS Bacterial leader peptidase 1 (S26A) family signature 154 170 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele25g0186 278 PRINTS Bacterial leader peptidase 1 (S26A) family signature 213 225 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele25g0186 278 Pfam Signal peptidase, peptidase S26 138 278 IPR019533 GO:0004252|GO:0006465
Lele25g0186 278 ProSitePatterns Signal peptidases I signature 3. 262 275 IPR019758 GO:0004252|GO:0016020
Lele25g0186 278 PANTHER SIGNAL PEPTIDASE I 123 278 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele25g0186 278 CDD S26_SPase_I 157 278 IPR019533 GO:0004252|GO:0006465
Lele25g0186 278 Gene3D Umud Fragment, subunit A 163 278 - -
Lele25g0186 278 TIGRFAM sigpep_I_bact: signal peptidase I 140 278 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0186 Lele-ChrLele25 1113000 1115083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0186 166 278 MADS-box Gene Family AT1G29960 32.174 2.48e-09 52.8