Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0175 ATGATCATAAAGCGCTCACTTCTGACCCTTCTAGTCGTGTTTCTCCTCCCCCTTATCACCGCCCAATCGAACCGCCGCCACTGCCAACGAACATGCCCTCCACGTCACTCCCTCCGGAGCCTCCCTCACGCCTTTGGCTTCTCTTCCGGCTGCGCCATCAGCCTCAACTGCACACCCGCCGGCGGAATCCTCATCGGAGATTACCCGGTCCACTCTATTAACTCCGATACAATAATCGTCGGCGTCAAATCCCAATGCGATCGTCCGTTTCATACCTTCCGTCAACTCTTCAGCCACAGATACGCGCCCACTTCGCGAAACGCCATCCTCTTGCAAAATTGCGGCGAAACGCTCTCCCCATGCGTCCTCCCGGCGACTATGGTGCAGACTCACTTCGAGTCGGAAAACTGCAGCTCTGGCGGTGGCAATTTGAGTTGCTATTACGAAAACTCTACCGTTGATTTTATGAACCTCCAGAATTTAACGAACAAACGGTGTCGGTACCTTGTGTCGTCGATAGCGGCAGAGGATTTAAGGAACGATTCGGATATCAGTGCGGCGACGGCGGTGTCCTTGGAGGTTGAGACGATTGAGCTCGGATGGTGGCTGGAAGGAGAGTGCCAATGTTCCCATGATGCAAATTGTACGAGATTAAAATCGCCGACTGACAAGAAGCCGGGGTATCGGTGCCTTTGCAAGGAAGGATTCACGGGCGATGGGTATTTGGCCGGAAGTGGTTGCCGGAAAGCCTCTTCATCCTGCAACCCAGCAAAGTACATGTCTGGCCAATGTGGAGGGGCAACCAGATTTGTTGTCTTAATTGGAGGGGTGGTCTTTGGAGCTTCACTAATGATCGGTTTGGGTCTAATATGTTGTTTCTTTCGGCGGCGCTCCAAATTAAGAGTCACACAGAGCACAAAAAGGCGCCTGACCGAAGCTACCAGCAATTACAGCGTTCCTATTTATACCTACAAAGACATCGAGAGAGCCACAAATAACTTCTCAGAGAAACAGAGGCTTGGAACTGGGGCATATGGGACTGTTTATGCTGGAAAACTTCACAACGACGAATGGGTCGCCATCAAAAGGATCAAATACAGAGACACTGACAGTATCGATAAAGTAATGAACGAGATCAAGCTCATTTCGTCTGTGAGCCATCCCAATCTAGTCCGCCTGTTGGGTTGCTCTCTCGAATATGGAGAACAAATCCTTGTCTATGAGTTCATGCCCAATGGAACGTTAAATCAACATCTGTTAAGGGAGAAAGGGACGGTACTTCCATGGCCGGTTCGACTCACTATTGCTGCTGAGACAGCACAAGCCATTGCACATCTCCACTCTGCCATCAATCCCCCTATTTACCACAGAGATATCAAGTCAAGCAACATACTGTTGGACAACAATTTTAGATCCAAAGTTGCAGATTTTGGTCTCTCAATACCCGGGATGACCGAAATATCTCACATTTCAACTGCCCCACAAGGAACGCCTGGCTACGTTGATCCACAATACCATCAAGATTTTCACCTTTCTGATAAAAGTGACGTTTATAGCTTTGGGGTTGTTCTTGTTGAGATCATAACAGGATTGAAAGTGGTGGACTTTACTCGCCCCCAGAATGCGGTGAATTTGGCTTCTTTTGCTACGGACAGGATTGGGAAGGGGCTTTTGGACGAGATTATAGATCCATTCCTCGAAGCACATATGGATGATTGGACCCATTTCTCCGTACGCAAGGCAGCTGAGCTAGCATTTCGATGCCTCGCATTCCACAGGGACATGAGGCCTTCAATGACAGAAGTTGCCGCTGAGCTGGAGCAGATCAGAATGAGTAGGTGGACAACCTCAGAAGACAGCAATCGGATAGCCTCAACAGAGTTGTCCTCGTCTCCTCCTTCCTCTGATGAAAGTGAGAAACCTCTCAGCGTGAAAATAAAGGAGGCGGGACCACCGGAGGGAAAAGGGCTTCTCAAGTTGCAGACTGAGCCTGCCACTTTGAATTCAATGGAAAAGAACTGTTCTCCGGTCTCAGTGCAAGACCCAGCCTTTTGGCTGAGCGAAAAGAGCTCTCCTTCATCGAATAGTTTGTTGAGTAAATCATTCGAGTGA 2112 0.492 MIIKRSLLTLLVVFLLPLITAQSNRRHCQRTCPPRHSLRSLPHAFGFSSGCAISLNCTPAGGILIGDYPVHSINSDTIIVGVKSQCDRPFHTFRQLFSHRYAPTSRNAILLQNCGETLSPCVLPATMVQTHFESENCSSGGGNLSCYYENSTVDFMNLQNLTNKRCRYLVSSIAAEDLRNDSDISAATAVSLEVETIELGWWLEGECQCSHDANCTRLKSPTDKKPGYRCLCKEGFTGDGYLAGSGCRKASSSCNPAKYMSGQCGGATRFVVLIGGVVFGASLMIGLGLICCFFRRRSKLRVTQSTKRRLTEATSNYSVPIYTYKDIERATNNFSEKQRLGTGAYGTVYAGKLHNDEWVAIKRIKYRDTDSIDKVMNEIKLISSVSHPNLVRLLGCSLEYGEQILVYEFMPNGTLNQHLLREKGTVLPWPVRLTIAAETAQAIAHLHSAINPPIYHRDIKSSNILLDNNFRSKVADFGLSIPGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFTRPQNAVNLASFATDRIGKGLLDEIIDPFLEAHMDDWTHFSVRKAAELAFRCLAFHRDMRPSMTEVAAELEQIRMSRWTTSEDSNRIASTELSSSPPSSDESEKPLSVKIKEAGPPEGKGLLKLQTEPATLNSMEKNCSPVSVQDPAFWLSEKSSPSSNSLLSKSFE 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0175 703 Gene3D Laminin 207 242 - -
Lele25g0175 703 MobiDBLite consensus disorder prediction 617 675 - -
Lele25g0175 703 SMART serkin_6 334 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0175 703 ProSiteProfiles Protein kinase domain profile. 334 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0175 703 Gene3D Phosphorylase Kinase; domain 1 295 409 - -
Lele25g0175 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Lele25g0175 703 MobiDBLite consensus disorder prediction 617 638 - -
Lele25g0175 703 FunFam Wall-associated receptor kinase-like 14 301 409 - -
Lele25g0175 703 Gene3D Transferase(Phosphotransferase) domain 1 410 630 - -
Lele25g0175 703 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Lele25g0175 703 SUPERFAMILY Protein kinase-like (PK-like) 310 607 IPR011009 -
Lele25g0175 703 FunFam Wall-associated receptor kinase-like 20 410 619 - -
Lele25g0175 703 Pfam Protein kinase domain 334 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0175 703 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 639 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0175 Lele-ChrLele25 1055930 1059457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0175 1 698 Receptor kinase-like Gene Family AT2G23450 49.579 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele25g0175 Pkinase 2.6e-42 CL0016