Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0169 ATGGTGTATTACAGTTTCGTTTGCCACATTATTGGCGAATGGGGAATCAACCTGGTAAAGGGTATGGACGTATCATGGAAGATGAAATTGAAATGCACAAATAAATCTGTTGACAACTTTTTGTTCGAGTCTCATGCTATTCTTTTCCTTGGTTTATTCCCTGTGAAGGTTACCTTTGAGGATCTAGAAGAGATGGTCGGGGACAAGTGCGAGTTTGATCTTCTGGTCATTGGCTTGCAGGAGGCTCCGCGAAACAAAGTTGCAAAGATGCTGAAAGCAGCTCTGGTTGATACTCACATCTTGATAGGTAAAGTTACCATGCAGTCTTTGCAGTTGTATCTGTTCGGGCCCAAGAATGCTGGATCATTAATTAGAGAATTGAAGGTGGACAAAAAATCAGTTGGAGGCTGCGGAGGAATAATAGGAAGGAAGAAAGGGGCAGTGGCAATCTGGATTAACTACAAATCCATAAGGATGGTGTTCATTTCTTGCCATCTCTCAGCTCATGGGCGCAGAGTAGAAGAAAGGAATTCAGAATGCAGGCACATATCACACTCCCTCTTCTCCAAGAACTGGAATCCATATGCCAGACCAGCCCACGTCACTGTTTGGATGGGAGATCTCAACTACAGGCTACAAGGCATGGATACCTACCCGGCCAGAGCTCTCATCCAAAAGGACCTCCACAAACAGCTGCTTGTCAACGATCAGCTCTTACAGGAGGCGGGACGAGGACAGATTTTCAATGGGTATTGTGAGGGCACATTGACATTCAGGCCAACTTACAAGTATAACGTAGGAAGTAGCAACTATGATACCAGTTATAAGGTGAGGGTGCCGGCTTGGACAGATCGTATATTGTTCAAGGTAGAAGACGAAAACGACACGGAAGCAATCTTAGACTCGTATGAATCAATGGATGAGATAAACGGTTCTGATCATAAGCCAGTGAAGGCTCGACTGTACTTAAGACTTCGTCAAACCTCCCCAGTACTTGTACCTTAA 1005 0.4468 MVYYSFVCHIIGEWGINLVKGMDVSWKMKLKCTNKSVDNFLFESHAILFLGLFPVKVTFEDLEEMVGDKCEFDLLVIGLQEAPRNKVAKMLKAALVDTHILIGKVTMQSLQLYLFGPKNAGSLIRELKVDKKSVGGCGGIIGRKKGAVAIWINYKSIRMVFISCHLSAHGRRVEERNSECRHISHSLFSKNWNPYARPAHVTVWMGDLNYRLQGMDTYPARALIQKDLHKQLLVNDQLLQEAGRGQIFNGYCEGTLTFRPTYKYNVGSSNYDTSYKVRVPAWTDRILFKVEDENDTEAILDSYESMDEINGSDHKPVKARLYLRLRQTSPVLVP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0169 334 FunFam Type IV inositol polyphosphate 5-phosphatase 11 47 330 - -
Lele25g0169 334 PANTHER INOSITOL 5-PHOSPHATASE 60 326 - -
Lele25g0169 334 SUPERFAMILY DNase I-like 70 325 IPR036691 -
Lele25g0169 334 SMART i5p_5 45 329 IPR000300 GO:0016791|GO:0046856
Lele25g0169 334 Gene3D Endonuclease/exonuclease/phosphatase 24 331 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0169 Lele-ChrLele25 1025415 1027832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0169 136 325 Acyl Lipid Metabolism Gene Families AT2G43900 31.330 3.44e-25 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0169 25 1025415 1027832 Lele27g1914 27 23702851 23707625 hybridization
Lele25g0169 25 1025415 1027832 Lele28g0180 28 1051228 1056410 hybridization