Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0165 ATGGAAGTTTCCAGACCTCTGAAATCTCATTGTAGATTAAAGCACCGTTCTCTGACCCCTATTAGGATTTTAAGGGGGGTTTTATGTCTAGTGGTGTTTATTTCTACAGCTTTTATGTTTTTAGCCTATTTTACACCTGTGGCAGCTGTGTTAATGCGGCTTTTCAGTGTGCGTTGTAGTAGGAAGGCCGTTTCATTCCTCTTTGGACTTTGGCTAGCCCTATGGCCTTCTTTATTTGAAAAGATAAACAAAACTAAAGTGGTCTTTTCTGGAGATAGTATTCCGATGAAGGAACGTGTTTTACTTATTGCAAATCACAGAACTGAGGTTGATTGGATGTACTTGTGGAATCTAGCACTCCGAAAGGGAAGTCTGGGCTACATAAAATACATACTTAAGAGCAGCTTGATGAAGCTGCCTATCTTTGGTTGGGGATTTCACTTTCTGGAGTTCATTGCAGTGGAGAGGAAGTGGGAGATAGATGAGCCAATATTGATCAGTACACTTTCCACATTAAAGAACCGTCAAGATCCTCTATGGCTAGCCATTTTCCCGGAAGGAACTGATTATACGTACTGCCTCATCATTCCTCTTGCCTTTCAGTGTCTTTTGACTTCTAAGTGCTTCGAAGAGAAGAGCAAAAAGAGTCAAAATTATGCGGCTGAAGTTGGGCTTCCTGTGCTTAAAAACGTGCTACTTCCAAAAACTAAAGGGTTTTATGCTTGCTTGGAAGTTCTACGAGACTCACTGGATGCAGTATATGATGTGAGCATTGAGTACAAGAACCAACGTCCTTCTTTTCTGGACAATGTCTTCGGGATCGATCCTTCAGAAGTGCACATACATGTTCGGCGAATCCCTATCGATGACATTCCAGCTTCCGAAACCAAAGCTGCTTCTTGGCTAATGAATGCGTTCCAGATCAAGGACCAGTTGCTTTCTGATTTCTACATTGAAGGCCAATTCCCTAACCAGCTAAATGAAAGGGAACTTTCTACTTTCAAGTGCCTGGTTACTTTTGCTGCGGTGGTTTCTTTGACTGCCGTGTTCACTTATCTTACATTTTTTTCTCTCATTTGGTTCAGGGTATATGTAGGCCTGTCTTGTGTATATCTTGCTATTGCCACACGTTTCAAACTGAAATTGATGCCACTTGCAGATTATGTTAATGCACTCTTTTACGGCAAGAAACAAAAGAGTGGATAA 1206 0.4138 MEVSRPLKSHCRLKHRSLTPIRILRGVLCLVVFISTAFMFLAYFTPVAAVLMRLFSVRCSRKAVSFLFGLWLALWPSLFEKINKTKVVFSGDSIPMKERVLLIANHRTEVDWMYLWNLALRKGSLGYIKYILKSSLMKLPIFGWGFHFLEFIAVERKWEIDEPILISTLSTLKNRQDPLWLAIFPEGTDYTYCLIIPLAFQCLLTSKCFEEKSKKSQNYAAEVGLPVLKNVLLPKTKGFYACLEVLRDSLDAVYDVSIEYKNQRPSFLDNVFGIDPSEVHIHVRRIPIDDIPASETKAASWLMNAFQIKDQLLSDFYIEGQFPNQLNERELSTFKCLVTFAAVVSLTAVFTYLTFFSLIWFRVYVGLSCVYLAIATRFKLKLMPLADYVNALFYGKKQKSG 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0165 401 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 18 374 - -
Lele25g0165 401 SMART plsc_2 100 240 IPR002123 GO:0016746
Lele25g0165 401 Pfam Acyltransferase 89 258 IPR002123 GO:0016746
Lele25g0165 401 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 37 188 - -
Lele25g0165 401 Pfam Acyltransferase C-terminus 272 340 IPR032098 -
Lele25g0165 401 CDD LPLAT_LCLAT1-like 78 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0165 Lele-ChrLele25 1006103 1007779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0165 1 384 Miscellaneous Gene Families AT1G75020 63.802 6.08e-178 499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0165 25 1006103 1007779 Lele27g1918 27 23721211 23724888 hybridization
Lele25g0165 25 1006103 1007779 Lele28g0176 28 1032173 1035825 hybridization