Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0145 ATGTTTCATTCAAGTGGCATCACAGAGAAATACTGGAATGTAGAAAAGAAATCTGCCCAGCGTTTGGCAGGCCCTCAAATTCTCTCAAGCCAAGCTCTGGATTTATGGGATTCACTTTCATCAGATCCTGCCATAATCAAAGCCCTCGCCAACACAGGCATAGGAATCGTCATCGAAGCAGCAAACGGTGACATACCGGCACTTGCTTCTGATCCCAACTTTGCAAAAAACTGGATCAACTCCAACGTGATCCCATTCTACCCTGCCAGCGACATCATCCTCGTCACAGTGGGAAATGAGGCCATGACCTCTAAAGACCAGAATCCGATCAATCAATTGGTGCCGCAATGCAGAATCTGTATAACGCCCTCAATGCCGAATCTATGGGCTGAAAGATTAAGAACGTGGAGATCGTGGTTGCTGAGACTGGCTGGCCGTATAAAGGAGACAACAACGAGCCCAATCCAATATGGTGGGGCCTGTTTTGAGCCCAACACAGTGACGTCACATGCCATTAATCTCTATTACCAAACTGTTGATCGAGATCCTTGGAATTGTGATTTCTCGCACACAGCCGTGTTGTCGTCTAGTAGTCATTGTTATGACCACTGCGTCTACCCAGGGCCAGGGGGCCCTCAACACTCGAACTCGATCGATCCTTTGGTCAGGTATTCACGTAGAAGGCGAGAACAAGAAAGCAAACCAAAATCTGGAGAAAGGAAAAATATGGCGACGCGAGAGAGGGAGAGAGATCTAGAGCTCCTCATTCCTGTCTCAGGAATCTCTGAGATTGACATGGGATCCTCTAAATCACCCTCCGCTTCTACTCCCACTCTGATTTCTACACATCACCATGCCGGTCAAGAGGCATTTTCCAAGGTAATTCGCAGCTGGGCCTCAAAGAAGTTCATGTCAGGATGTGTCATCCTCCTTCCTATGGCTATAACATTCTACATCACTTGGTTTTTTGTCCGCTTCGTGGATGGTTTCTTCTCCCCTATATATAACCATCTCGGAATCAATATTTTTGGTCTTGGATTTCTTACTTCCATCACTTTCATCTTCTTAGTTGGTGTTTTCATGTCATCGTGGCTGGGAGCTTCCCTTCTCACCATTGGTGAATTTTTCATCAAGAAAATGCCTCTTGTAAGCTACATCTATTCTGCTTCAAAGCAAATAAGTACTGCAATATCACCAGATCAAAACTCAAATGCTTTCAAGGAGGTTGCGATCATACGGCATCCGCGTGTCGGTGAGTATGCATTAGGGTTCATTACTTCTTCGGTCATACTGCAGAGGAACTCGGATGACGAAGAGCTCTGTTGTGTTTATGTTCCTACCAATCACTTGTACCTTGGAGATATTTTTCTGGTCAGCCCAACTGATGTTTTGAGGCCTAATTTGTCAGTTCGAGAAGGGATAGAGATTGTCATATCTGGTGGCATGTCAATACCTCAAATATTGACAACAATGGGTGCTAAGGCTACTCTCGCAAGAATGGGTGTCTTTGCAGGATCCAAAGCTTGCTTTTCCTGGGCGAGAAATGGAAGCTATAAGCTAGATTTGCCGTCGATTCTAATTTATCTGATGGACTCAATAACGGGCAGTCATTTTCTTGGCCTCAGAAATAAACTCAAAAGAACTGATCAGATCCAGATCAGCCTGTTTTTCTCTTACCTCGTTCAAGCGCAATCAAAAGCAGAAGGGCTTTCCTTGCCTCGCTCGACTTCTCGTCTCTCGTCCTCACTATCATCCATGGCTGACCGTACCGCCTCTGATGCTCGCCTCCACATCTCCGCCAATCCTCCATATCAGATCTCCAAAGATTTTCAGGGCCCTGAAAATCCTATTCCCCTCTCACCCCAGTGGCTTCTGCCAAAGCCTGGAACAGGAAGTGTGGAAAATCATGTGGTTTCACCTCCACCATATGGCAATCGCTTGGAGACTGTCAAGACATCTGGAAATGGTGAGGAACTGCATGATGCCCAAAAGAGAAAGGATGTTTTCAGGCCATCCATGCTTCATTCAGAAAGTGGTCGTCGTGACCGTTGGCGTGATGAAGAGAGAGACACTAAGTTCATAATAAAGGACCGTTGGAGGGATGGAGACAAAGACCTTGGTGATGGTCGGCGGGGGGATCGATGGACTGAAAATATGCCCATAAGGCACTTTGGAGAATCACGTCGCGGTGTACCTGACAGATGGAATGATTCAAATAACAGAGAAACAAACTATGATCAGCGGCGTGAGAGTAAGTGGAACACACGTTGGGGTCCTGATGATAAGGAGTCAGAAAGTTTGCATGAAAAATATGGTGGTTCTAGGAAAGATGGTGAAGTTCATATGGACAAGGGCTTGTCAAACATTTCCAATCATGCAAAGGATGAAAAGGAGGGAGACCATTATCGTCCATGGAAGCCTAATTCCACACAAAGTCGTGGAAGGGCAGAGCCACCCCACCACCAAAGCTTAACACCAAACAAACAAGGCCCTACATTTTCTTGTGGACGTGGCCGTGGGGAGAATATGCCTCCTGTATTTTCTCTTGGACGTGGTCGGGTTGGCCCTAGTGGTAGCCCTATGAATAGTATCTCTTCATATTCTCATTATCCTGGAACCAATGTGGATAAGATTGAAAGTGTACCTGGAGAGCCTGGTCTATTTATGTACAGCAGGATGAAGTTACTTGATGTGTATAGGGTAACTGACAAGTATGCGACTAGAAAATTTGTGGATGAGTTTGTTCAAGTGCCTCATCTAACACAGGATGAACCGCTAGAGCCTCTAGCACTTTGTGTGCCAACTCCTGAGGAACAGGATGCTTTAAAAGGTATTGACAGAGGGGAAATACTTAGTAGCGGTGCACCTCAGGTGCCAAAAGATGGATGGAATTCCGCTGATGCTGCACAGTCAAGACGAATGAAGCTAGGAGGTGGCCCTTTCCAAGACAAGGGTGAAGATGTAGTTCCATTCAAACTGGCTGATGAGGTGCCTACCAATAGAGAATTAACCTTTGAAGGAGTTGGTTCTGTTGATCCTGCTGCTGCATTGCGAGCAATGCCACTGAGCGAGCATTCAAACACTTTGCATGATATGCCTGGTGATCTTAAGTCAAGAAACTTAGATATGAGCTGGCCACATCAACCAAGGGAACCTCAATGTCAGCGTGAAAATAATCTGAGTTATTTGTCTGACACCAAAGATGTATCTAAGTGGAAAACTAATGAAGATCCCATAGTTAAGAGGCAGCTATCTGGCATTTTTGACAGTGGGTTTGAAACACGGAGAGTTCCTCAGACTCCTGCAGAGGATTTATCCCTTCTGTATAAAGATCCTCAGGGTCAAATTCAGGGTCCCTTTAAAGGAATTGATATTATTGGATGGTTTGAGGCTGGTTATTTTGGCATTGATTTACCTGTTCGTCAGGAAAATGCTCCATCTGACTCACCGTGGTTGTCACTTGGTGATGCCATGCCACATCTGCGAGCTAAGGCCCGGCCACCACCAGGGTTTTCTGCACCAAAACCAAATGAGTACACAGATGCAACTGGTCGGCAAAATTCTAATGCCTTTGGGAATATTCATTCTTGCTTAAGTGAGATTGAAATGATGAGAAATGATCCTAGGAATAGACAGAGCTCTGCCAAAGAAGCTGAAAATAGGTTTTTGGAGTCACTGATGTCTGGAAATAAGAGCAGTCCCCCAGTTGATAGTCAGACTTTGTCAGAAGGAGTAGATACTGGAAACATGTTCATGCTGGCCAAGAGGATGGCACTTGAACGACAGAAGTCGATACCTAATACTTACCAGTATTGGCCTGGGAGAGAGGTAGCATCCCTAGTGTCAAAATCGGATATTGTCCCAGATGCACCTGCACCACCACATTCAAAACTCTTTGCTTCAGTAAGTGACAGCGCTCTTCAGCCACGGTCCCAGAATGCTGACTTGATGTCAATCATCCAAGGACTGTCTGACAGGTCATCCACAGGGTTAAATAATGGTGTAGCTGGATGGTCAAATTATCATGTTCAAGGCGGTTTGGATTCACTGCAGAATAAAATTGACTTACACCATGATCAGAACTTCCCTCAAGGGCCATTAGGAATTCAACAACAAAGGCTGCAAGCTCAAAACCAATTGCCTTTTAGCAACCTAGCAGGTCAAGCTGTAGACAACCCGTCTAGTATTTTAACAGCGGAGAAATTAGTTTCTTCTGGTCTGTCCCAGGATCCTCAAATGTTAAATATGTTGCAACAGCAATATTTGATGCAGTTGCATTCTCAGGCAGCTGTTCCAGTGCAGCAAGTGTCATTGCTGGATAAATTTTTCTTGCTGAAGCAACAACAGAAGCAGGAAGAGCAGCAGCAGTTATTGAGGCAACAGCAGCAGCAGCAACTACTTTCTCAGGTGCTGCAGGAGCATCAGTCTCAACAGCGCTATGGTGATCCTTCATATGTACAGTTGCAGGGAGGTGGAATACCGATGGGGAATTTGCATGTTGATCCTTCTCAACTTCAGCTACCACAAGAGATTTTTCCAATCAGTTCACAAACACCAACTCCGAGCATGCAAGATACTCTTGCTAAGACTTTGAGCTTACCTGTGCAGGATACTAGTTATGGTGTGAGCAGTGAAGCTTCGGTCCCACCTATAGCTCACCAAATATTTGGCAATTTTGCCCGTCAGAAAAGTTGGGGCCCTATACTTCTGGAGCAAAGTAATGAATTGCATCAGAAGGAATCATTGCCTGTATCAACAATTGTAGAAAGTTCCATATTGCATGAAAACAGAATGAAAGAGGAACCTGTGCTGAAATCTCTTGCTGTTTCTGACACTGCTGCTAAATCTCTGGAGAAGATGCCAGACAACACATGCAAAGCTGATGGGATTTTAACTGCAACTTCTGGTGAGCATTCCATACCTGTGCAATCTGCTGCAGCTGATGCTGGCAAGCCATCAGCTGGAACTTGTGGCATGGAGTCTCCAGCTGCAAGCAATATGGATGGTAGTGTGAAGATTGAATCAGACGGTGCACATGTAGAACAGCCTGCTGGAAGAGACAGGCCCCGTGATGAGCACACTTCTGCAGATGTAAAAAATGTGGAAGTGCGGGAGCCGAAGAAGGCTTCTGAGAAGAAGTCCAAGAAGCAGAAGTCTTCCAAATCTCAGTCTTCTGATCTAGTAAAAGGATTGCCAAAGAATCCGTTTTTGGAGCAGTCAAAGCAGTCAGAAACTCTAAAGCCAAATGCTGACATCAAGTTGGGAGAAGCCAGCAAGGGAGGGCCAGTTTATGAAACCAATTTGCCACCAGCAAGAGATAAGACCAATAAATCTATTGCAGCTGCCGAGGTGGCTGATCAAGATGTCAATGTTTTGTCTGCAACTGTTCCTGGAAGAATCACTGAAACTGGTGTTGAGGGTGACATGAAGGCAGCGAATTCTGTTTCCACGCAGAATACTGAAGTAACTGTGGGCCGTGCTTGGAAACCTGCTGTGGGTATCAAGGCAAAGTCTTTACTAGAAATTCAACAGGAAGAACAAAGAAAGGCACGAACTGAATCACTTGTGTCTGAAATTACTACTTCTGTCAGCAACATGAGTCTGTCAACTCCTTGGGCTGGGGTTGTGGCCAATCCAGACGCAGTAAAGGTATCCAATGAAAGTCAAAGAGAACTAGGTAATACCGAATATTTAAGTAAGCCTGAAGCTTCTCAAAATGCTAAGGGAAAGAAAAGCCAACTACATGATATATTGGCTGAAGAAGTTTTGAAGGAATTTAGCGAAAGAGATGCTGAAATTCCAGACATGTCTTCCTCCCAAAATACAGTGATTCATTCTGATTCAATAGATGATTACAACTTCATTGAGGCAAAAGACTCTAAACGAAACCGGAAGAAGTCAATAAAATCAAAGGGTTCCGGGGCCAAGATCTCAAACTCCATTTCATCTAGTGAAGTAGCTATTAGTACAAGTTCCATAGAAAAAGGGAAAAGTTCTCGCACTGTGCAGGCGGAGAAAGAAGTAGTGCCTGCCATCCCTGCAGGACCCTCTCTTGGAGACTTTGTTCCCTGGAAAGGGGAGCCTGTAAGCCCATCGCCATCTCCAGCTTGGTCTGCTGATGCTGGTCGGGTTCCTAAACCAACTTCATTAAGGGACATTTTAAAGGAGCAAGAGAAAAAGTCTTCTGCACAGCCTAGCCAATTACCTACTCCACAGAAATCACATCCTGCCCAAGCAGTTAAGGGTACTGGTTCGTCATGGCCAATATCGGCATCCTCACCATCTAAAGCTTTATCTCCAATTCAGATGAGCTCACATTCTACTTCTCAGTCAAAATACAAAGTGGATGATGACTTGTTCTGGGGTCCCATGGAGCATTCTAAGCAAGAATCTAAACAGTCAGATTTCCCTCAGCTTGCAAGCGAGGGGAGTTTGGGATCCAGAAAGACTCCCATTAAAGGTAACTCACCTGGACATTTAAACCGACAAAAATCAGTTAGTGGTAAACCAGCTGAGAGATCTCTGTCTTCATCCCCTGCATCATCTGTGTCTTTGCTGAAATTGAAAAAGGATGCCGTGACTAAGCATTCTGAGGCCATGGACTTCAGAGGTTGGTGTGAGAACGAGTGCGTTAGGCTTGTTGGGACAAAAGATACAAGTTTCCTTGAATTTTGCCTGAAGCAATCCAGATCAGAAGCCGAGATGCTTTTGATAGAAAATCTTGGGTCATATGACCCTGATCATGAATTCATTGATAAATTCCTAAATTACAAGGAGTTGCTGCCATCAGATGTACTTGAAATAGCTTTTCAAAGTCGCAATGATTACATGGTTCCTGGACGTAGTGTTGGAGACATGAATCTCGGAAATGCAGACATGAAGGACCTTGACACATTTGCCCCCGACGGATCTTCAAAGGGCGGAGGAAAGAGGAAGGCTAAGAAAGGGAAAAAGGTCAGCGCTTCAGTCTTAGGCTTTAACGTCGTAAGTAACAGGATCATGATGGGCGAGATCCAGACAGTAGAAGATTAA 7032 0.4499 MFHSSGITEKYWNVEKKSAQRLAGPQILSSQALDLWDSLSSDPAIIKALANTGIGIVIEAANGDIPALASDPNFAKNWINSNVIPFYPASDIILVTVGNEAMTSKDQNPINQLVPQCRICITPSMPNLWAERLRTWRSWLLRLAGRIKETTTSPIQYGGACFEPNTVTSHAINLYYQTVDRDPWNCDFSHTAVLSSSSHCYDHCVYPGPGGPQHSNSIDPLVRYSRRRREQESKPKSGERKNMATRERERDLELLIPVSGISEIDMGSSKSPSASTPTLISTHHHAGQEAFSKVIRSWASKKFMSGCVILLPMAITFYITWFFVRFVDGFFSPIYNHLGINIFGLGFLTSITFIFLVGVFMSSWLGASLLTIGEFFIKKMPLVSYIYSASKQISTAISPDQNSNAFKEVAIIRHPRVGEYALGFITSSVILQRNSDDEELCCVYVPTNHLYLGDIFLVSPTDVLRPNLSVREGIEIVISGGMSIPQILTTMGAKATLARMGVFAGSKACFSWARNGSYKLDLPSILIYLMDSITGSHFLGLRNKLKRTDQIQISLFFSYLVQAQSKAEGLSLPRSTSRLSSSLSSMADRTASDARLHISANPPYQISKDFQGPENPIPLSPQWLLPKPGTGSVENHVVSPPPYGNRLETVKTSGNGEELHDAQKRKDVFRPSMLHSESGRRDRWRDEERDTKFIIKDRWRDGDKDLGDGRRGDRWTENMPIRHFGESRRGVPDRWNDSNNRETNYDQRRESKWNTRWGPDDKESESLHEKYGGSRKDGEVHMDKGLSNISNHAKDEKEGDHYRPWKPNSTQSRGRAEPPHHQSLTPNKQGPTFSCGRGRGENMPPVFSLGRGRVGPSGSPMNSISSYSHYPGTNVDKIESVPGEPGLFMYSRMKLLDVYRVTDKYATRKFVDEFVQVPHLTQDEPLEPLALCVPTPEEQDALKGIDRGEILSSGAPQVPKDGWNSADAAQSRRMKLGGGPFQDKGEDVVPFKLADEVPTNRELTFEGVGSVDPAAALRAMPLSEHSNTLHDMPGDLKSRNLDMSWPHQPREPQCQRENNLSYLSDTKDVSKWKTNEDPIVKRQLSGIFDSGFETRRVPQTPAEDLSLLYKDPQGQIQGPFKGIDIIGWFEAGYFGIDLPVRQENAPSDSPWLSLGDAMPHLRAKARPPPGFSAPKPNEYTDATGRQNSNAFGNIHSCLSEIEMMRNDPRNRQSSAKEAENRFLESLMSGNKSSPPVDSQTLSEGVDTGNMFMLAKRMALERQKSIPNTYQYWPGREVASLVSKSDIVPDAPAPPHSKLFASVSDSALQPRSQNADLMSIIQGLSDRSSTGLNNGVAGWSNYHVQGGLDSLQNKIDLHHDQNFPQGPLGIQQQRLQAQNQLPFSNLAGQAVDNPSSILTAEKLVSSGLSQDPQMLNMLQQQYLMQLHSQAAVPVQQVSLLDKFFLLKQQQKQEEQQQLLRQQQQQQLLSQVLQEHQSQQRYGDPSYVQLQGGGIPMGNLHVDPSQLQLPQEIFPISSQTPTPSMQDTLAKTLSLPVQDTSYGVSSEASVPPIAHQIFGNFARQKSWGPILLEQSNELHQKESLPVSTIVESSILHENRMKEEPVLKSLAVSDTAAKSLEKMPDNTCKADGILTATSGEHSIPVQSAAADAGKPSAGTCGMESPAASNMDGSVKIESDGAHVEQPAGRDRPRDEHTSADVKNVEVREPKKASEKKSKKQKSSKSQSSDLVKGLPKNPFLEQSKQSETLKPNADIKLGEASKGGPVYETNLPPARDKTNKSIAAAEVADQDVNVLSATVPGRITETGVEGDMKAANSVSTQNTEVTVGRAWKPAVGIKAKSLLEIQQEEQRKARTESLVSEITTSVSNMSLSTPWAGVVANPDAVKVSNESQRELGNTEYLSKPEASQNAKGKKSQLHDILAEEVLKEFSERDAEIPDMSSSQNTVIHSDSIDDYNFIEAKDSKRNRKKSIKSKGSGAKISNSISSSEVAISTSSIEKGKSSRTVQAEKEVVPAIPAGPSLGDFVPWKGEPVSPSPSPAWSADAGRVPKPTSLRDILKEQEKKSSAQPSQLPTPQKSHPAQAVKGTGSSWPISASSPSKALSPIQMSSHSTSQSKYKVDDDLFWGPMEHSKQESKQSDFPQLASEGSLGSRKTPIKGNSPGHLNRQKSVSGKPAERSLSSSPASSVSLLKLKKDAVTKHSEAMDFRGWCENECVRLVGTKDTSFLEFCLKQSRSEAEMLLIENLGSYDPDHEFIDKFLNYKELLPSDVLEIAFQSRNDYMVPGRSVGDMNLGNADMKDLDTFAPDGSSKGGGKRKAKKGKKVSASVLGFNVVSNRIMMGEIQTVED 2343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0145 2343 Coils Coil 1444 1465 - -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 2126 2178 - -
Lele25g0145 2343 CDD GYF 1104 1161 IPR003169 GO:0005515
Lele25g0145 2343 PANTHER GYF DOMAIN-CONTAINING PROTEIN 586 2343 - -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 1933 1948 - -
Lele25g0145 2343 SUPERFAMILY GYF domain 1097 1161 IPR035445 -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 1643 1772 - -
Lele25g0145 2343 Gene3D Glycosidases 17 120 - -
Lele25g0145 2343 Gene3D - 1093 1170 IPR035445 -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 1679 1722 - -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 1886 1911 - -
Lele25g0145 2343 ProSiteProfiles GYF domain profile. 1104 1155 IPR003169 GO:0005515
Lele25g0145 2343 SMART X8_cls 143 206 IPR012946 -
Lele25g0145 2343 SMART gyf_5 1105 1160 IPR003169 GO:0005515
Lele25g0145 2343 MobiDBLite consensus disorder prediction 224 247 - -
Lele25g0145 2343 Pfam Protein of unknown function (DUF502) 349 449 IPR007462 -
Lele25g0145 2343 SUPERFAMILY (Trans)glycosidases 40 219 IPR017853 -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 725 860 - -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 805 832 - -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 1930 1949 - -
Lele25g0145 2343 Pfam Glycosyl hydrolases family 17 37 116 IPR000490 GO:0004553|GO:0005975
Lele25g0145 2343 Pfam GYF domain 1109 1153 IPR003169 GO:0005515
Lele25g0145 2343 MobiDBLite consensus disorder prediction 2060 2110 - -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 2133 2178 - -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 1954 2112 - -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 1972 1998 - -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 655 686 - -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 725 804 - -
Lele25g0145 2343 MobiDBLite consensus disorder prediction 1886 1913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0145 Lele-ChrLele25 898009 913930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0145 23 118 Glycoside Hydrolase AT5G42720 51.042 4.04e-24 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0145 25 898009 913930 Lele27g1936 27 23820893 23822550 hybridization
Lele25g0145 25 898009 913930 Lele28g0161 28 924926 937615 hybridization