Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0136 ATGTTGACTTTTCCTGTGATAAATAAGTACAATGGCTTCATAGTTTCAGGGACTTCTATGAGTAAAATATTAAGGGATCAATCCCATTTGCCATCTCATAAAATACTATTGGAAGTTGTTGGTCATGAACTTGGAGCATGGGTTCTCTTATCAGAGACTCAAAGGGCACTTGGCTTGCTTGCAGAGAAACAGCCCCGCTCTGCAAGCCGGCCAGAAGCAACAGCCAGAGTCACCGTAACTACGCCAAAACTTTCAAAGAGCTTGAAGAGTTTACAAGAGGCAGCAGAGCTTCATCACTGCAGAATCAAAGCTAGCGATTGGGCTTATAAATGGATACGGACGTTAACTTCACCAGCAGGTCAAGTTGCTGAGGAGGTACAAGATGAAACTCCCCTGAGCGACGAGGAGATAATTAAACGAAGCGTCAGTTTCTCAAACATAGCCATGGAATTACGACGAGTATTACTGAAGACAGCTGTAGTCTTGTTCTTTATTCAGTTTGGTCTAGCTAGAGACATATCTTCGAGCTTCGGAATAGAAAGGCTCGCGCTGCGTCAGCTTCGCTCGTCGTTGGGGATTCGTAGCAAGTACTGGCCCATAAAAGCGGAACCGTGCAGCAACTGGACCGGGGTTCGGTGCCAGAACGGGCGAGTCGTTGGGATCAACTTATCTGGTTTAGGACGAATCCGAGTCGGCCGTCTCGATCCCCGTTTGGCAGTGGATTCTCTTGTCAATTTCACACTCTTGGAGTCATTCGAAGCTTCTGGGTTCTTGCTGAATGGGTCTATTCCTGACTGGTTCGGGCAGCGCCTGGGGACACTCCAAAGGCTCGATCTAAGTTCTTGCTCACTCACGGGTCTCATTCCTCCATCGCTTGGGAATTTGAGCGGGATGAAGTTTCTGATTCTGGCAGATAATAGTCTCACTGGGAGAATGTCTTCCACATTGGGACAATTATCCAGTTTATCGGTTCTGAATCTCTCAGGAAATTCGCTCACTGGATTAATGCCCAACTCTTTCTCGTCTCTGGTCAATCTCACCAGCCTTGACCTTTCATCTAATTTTTTATCTGGTTCGATTCCATCCTATCTTGGTAACCTCAATAGGCTTCAGTTTCTGAATCTTTCCGACAATGGCTTCACCGCCTCAATACCTTACCAACTGAGCAATCTTTCTCAGTTAGTTCAGCTTGATCTAAGCAAGAATTCTTTGTCTGGGTCATTGCCAGGTGATATGTTTTCTAGTCTTACTTTCCTACGAAGTCTATCTCTGAGTAGGAATGCTTTTGATGGCGTTCTTCCTCCTGCATTGTGGTCAATGAGCCACCTGTCCGTCCTTGATGTATCCAGCAACACTCTTACTGGCACCCTTCCGAAACTTAGCCTAAATATTAATTCTACAGGTGCTATCTTCAACCTCTCAAACAATTTATTCTATGGATATCTTAATACTTCGTTTAAGAAACTTAGGATCATTGATTTGTCCGGTAATTATTTCCAAGGCAACGTGGCTGATCATGGCTTAAGTAATATTGCCCTTGATACAAATTGCCTAATAATGAGTCCGAAACAAAGGAGTTCCGGAGATTGTAGACTGTTCTATGCTCAGAGAAGCCTAATCTTTGTTGGTGCTCAAGAACCAGCCCCGTCCCCTTTGGCCGAAGCAGAGTCCAGAAATAACAAACGAGTGATATTCATTTTGTCAGGCACATTTGGTGGGCTTGTGTTTATTGTGATTCTAGCACTGGTCCTAGTACTGCTTCTACGAAAATGTGATAATAGCACTGAAACTCAAAAAAGGGAAGCAAACGAGGGAGCAGTTCAAGAAGGGGAAAGTCCTATGCCTCCTAAGAATCCTATGTTAGACAGTGGCATGGGAGAATCATATAGTTATGAGCAAGTGCTCCATTTGACTGGTAATTTTGCTGAAGTTAATATCATCAAGCATGGTCATTCCGGCGACTTTTTCATGGGAATCCTGGAAGGTGAAGTAAGTGTGGTTGTGAAAAGGGTAGATTTGAACTTAGTCAAGAAAGAATCATTCATGTTGGAATTGGAACTGCTAAGCAAGGCTTCACATACAAAATTGGTGCCGCTACTGGGGCACTGCTTCGAGAATGAGAATGAGAAATTTTTAGTTTACAAGTACATGCCAAATAGAGATTTGGCTACTTGCTTGCACAGAGTGAGTGGCTCAGACGATAAAGAACAATCTCTAGATTGGATCACCAGATTGAAAATTGCAATAGAAGCTGCTGAAGGCCTATGTTACCTGCATGATTGCAGCCCCCCCCCCTTGTCCATAGTTAGACTTGGAAGTTTGAGCGAGGTTACTTCCCAAGGAGATCTTAACCCGAGTGTCATCACAAGGTTATTTCGCAAGTTACAATCTTTTGATCAAAACAATCCTGGTTCATCATCTGCAACATGGGATTATGATGTATACTGTTTTGGGAAGGTCTTACTTGAGCTTGTTACCGGTAAGCTTGGCATTAGCAAGACAGAAGATGCCGGCACAAGAGAGTGGATAGAGCAAACAGTGTCATACATAAGCATAAATGACAAGGAACAGGTGAATAAAATAGTAGACCCGTCTCTTATAGTGGATGAGGACTTATTGGAAGAGGTATGGGCTATGGCAATTGTGGCCAGATCATGCCTCAACCCTAAGCCTTTTAAACGCCCTCCAATGGGGCATGTCCTAAAAGCACTGGAAAATCCATTGAAGATAGTGAGAGAAGAATATAACAGTAGCTCAGCAAGATTGAGAACAACTTCATCAAGGAGATCTTGGAGCACAGCATTCTTTGGGAGCTGGAGACAGAGCTCATCAGAGAGTGCTACTGCAACTGCAAGCAGAGAGGTTATTACTGCCAGTGGCTTTAAACAAACAGGCAGAGTAGGGTCTCAGGGTAGTGGTGGAAACGATCACTCTTCTTCCCACAAAAGGTTGTCCAGTGAAGTTTTCCCTGAACCACTGGAAATTCAAGAGGTGGAAACTGGAGACGCCAAATGA 3015 0.4415 MLTFPVINKYNGFIVSGTSMSKILRDQSHLPSHKILLEVVGHELGAWVLLSETQRALGLLAEKQPRSASRPEATARVTVTTPKLSKSLKSLQEAAELHHCRIKASDWAYKWIRTLTSPAGQVAEEVQDETPLSDEEIIKRSVSFSNIAMELRRVLLKTAVVLFFIQFGLARDISSSFGIERLALRQLRSSLGIRSKYWPIKAEPCSNWTGVRCQNGRVVGINLSGLGRIRVGRLDPRLAVDSLVNFTLLESFEASGFLLNGSIPDWFGQRLGTLQRLDLSSCSLTGLIPPSLGNLSGMKFLILADNSLTGRMSSTLGQLSSLSVLNLSGNSLTGLMPNSFSSLVNLTSLDLSSNFLSGSIPSYLGNLNRLQFLNLSDNGFTASIPYQLSNLSQLVQLDLSKNSLSGSLPGDMFSSLTFLRSLSLSRNAFDGVLPPALWSMSHLSVLDVSSNTLTGTLPKLSLNINSTGAIFNLSNNLFYGYLNTSFKKLRIIDLSGNYFQGNVADHGLSNIALDTNCLIMSPKQRSSGDCRLFYAQRSLIFVGAQEPAPSPLAEAESRNNKRVIFILSGTFGGLVFIVILALVLVLLLRKCDNSTETQKREANEGAVQEGESPMPPKNPMLDSGMGESYSYEQVLHLTGNFAEVNIIKHGHSGDFFMGILEGEVSVVVKRVDLNLVKKESFMLELELLSKASHTKLVPLLGHCFENENEKFLVYKYMPNRDLATCLHRVSGSDDKEQSLDWITRLKIAIEAAEGLCYLHDCSPPPLSIVRLGSLSEVTSQGDLNPSVITRLFRKLQSFDQNNPGSSSATWDYDVYCFGKVLLELVTGKLGISKTEDAGTREWIEQTVSYISINDKEQVNKIVDPSLIVDEDLLEEVWAMAIVARSCLNPKPFKRPPMGHVLKALENPLKIVREEYNSSSARLRTTSSRRSWSTAFFGSWRQSSSESATATASREVITASGFKQTGRVGSQGSGGNDHSSSHKRLSSEVFPEPLEIQEVETGDAK 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0136 1004 FunFam Predicted protein 612 716 - -
Lele25g0136 1004 ProSiteProfiles Leucine-rich repeat profile. 345 367 IPR001611 GO:0005515
Lele25g0136 1004 Gene3D Transferase(Phosphotransferase) domain 1 717 927 - -
Lele25g0136 1004 SMART LRR_typ_2 391 415 IPR003591 -
Lele25g0136 1004 SMART LRR_typ_2 319 342 IPR003591 -
Lele25g0136 1004 SMART LRR_typ_2 271 295 IPR003591 -
Lele25g0136 1004 SMART LRR_typ_2 343 367 IPR003591 -
Lele25g0136 1004 SMART LRR_typ_2 416 440 IPR003591 -
Lele25g0136 1004 MobiDBLite consensus disorder prediction 597 618 - -
Lele25g0136 1004 ProSiteProfiles Protein kinase domain profile. 641 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0136 1004 SUPERFAMILY Protein kinase-like (PK-like) 615 904 IPR011009 -
Lele25g0136 1004 MobiDBLite consensus disorder prediction 958 979 - -
Lele25g0136 1004 Gene3D Ribonuclease Inhibitor 339 529 IPR032675 -
Lele25g0136 1004 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 245 905 - -
Lele25g0136 1004 MobiDBLite consensus disorder prediction 958 1004 - -
Lele25g0136 1004 Gene3D Phosphorylase Kinase; domain 1 614 716 - -
Lele25g0136 1004 Pfam Protein tyrosine and serine/threonine kinase 646 760 IPR001245 GO:0004672|GO:0006468
Lele25g0136 1004 Pfam Leucine rich repeat 393 453 IPR001611 GO:0005515
Lele25g0136 1004 Pfam Leucine rich repeat 301 354 IPR001611 GO:0005515
Lele25g0136 1004 SUPERFAMILY L domain-like 197 502 - -
Lele25g0136 1004 Gene3D Ribonuclease Inhibitor 178 338 IPR032675 -
Lele25g0136 1004 Pfam Leucine Rich Repeat 274 295 IPR001611 GO:0005515
Lele25g0136 1004 FunFam Putative LRR receptor-like serine/threonine-protein kinase 717 925 - -
Lele25g0136 1004 ProSiteProfiles cAMP/cGMP binding motif profile. 646 688 IPR000595 -
Lele25g0136 1004 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 313 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0136 Lele-ChrLele25 836642 842437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0136 180 793 Miscellaneous Gene Families AT2G16250 44.595 3.19e-170 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lele25g0136 PK_Tyr_Ser-Thr 2.9e-12 CL0016