Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0115 ATGAAATGGGTTCTCAGGCTTCAGCCCTCACATGTGACTAAGCTTAAAGTTCTAATTTTTCGTGTAAAGGGAATGGCGACTCCTGTTGAGCCTCCAAATGGGATCAGAAGTGAAGGAAAGCATTATTACTCCATGTGGCAAACCCTGTTTGAGATTGATACAAAATATGTGCCCATCAAGCCTATTGGTCGAGGAGCGTATGGAATTGTATGCTCTTCAGTCAACCGAGAAACCAATGAAAAAGTTGCCATTAAGAAGATACAGAATGCTTTTGAAAACCGGGTTGATGCACTAAGAACTTTGCGTGAGTTGAAACTTCTTCGGCATCTCCAACATGAAAATGTGATTGCTTTGAAAGATATCATGATGCCTAATCATAGAAAAAGTTTCAAGGACGTCTACCTGGTTTATGAACTTATGGACACAGATTTGCATCAGATTATTAAGTCTTCGCAAGCACTGTCTAATGATCACTGCCAATATTTCCTCTTTCAGTTGCTTCGGGGCTTGAAGTATCTTCATTCAGCTAACATCCTTCATCGTGATTTGAAGCCTGGGAATCTTCTAATCAATGCCAACTGTGACCTAAAAATATGTGATTTTGGGTTAGCACGAACCGGCAGCACCAAGAACCAGTTTATGACAGAATATGTTGTCACTCGTTGGTATCGAGCACCAGAACTTCTGCTTTGCTGTGACAATTATGGAACATCTATTGATGTCTGGTCCGTGGGATGCATCTTTGCAGAGCTTCTTGGACGAAAACCTATTTTCCCTGGTTCAGAGTGTCTGAATCAGCTAAAACTAATTATCAACATACTTGGCAGCCAAAGGGAGGAGGATCTTGAATTCATTGATAATCCTAAGGCAAAGAGGTACATCAAATCACTTCCATATTCTCCAGGAACGCCATTTTCCCGGCTTTACCCAAATGCCCATCCATTGGCAATTGATCTACTGCAGAGGATGCTTGTTTTTGACCCATCAAACAGGATTAGTGTTACTGAAGCACTTCAACACCCTTACATGTCCGCTCTATATAATCCTAACAGCGACCCTCCAGCAATTGTTCCTATTGATCTGGACATGGAGGAAGACTTGGGGGAAGAGATGATAAGGGAGATGATGTGGAAGGAAATGCTTCATTACCATCCTGAAGCTGCTATGGCAAATACAGTGGTGTGCTCATGA 1191 0.4198 MKWVLRLQPSHVTKLKVLIFRVKGMATPVEPPNGIRSEGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLQHENVIALKDIMMPNHRKSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTGSTKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDLEFIDNPKAKRYIKSLPYSPGTPFSRLYPNAHPLAIDLLQRMLVFDPSNRISVTEALQHPYMSALYNPNSDPPAIVPIDLDMEEDLGEEMIREMMWKEMLHYHPEAAMANTVVCS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0115 396 ProSitePatterns Protein kinases ATP-binding region signature. 62 86 IPR017441 GO:0005524
Lele25g0115 396 SUPERFAMILY Protein kinase-like (PK-like) 48 349 IPR011009 -
Lele25g0115 396 Gene3D Transferase(Phosphotransferase) domain 1 140 369 - -
Lele25g0115 396 SMART serkin_6 56 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0115 396 Gene3D Phosphorylase Kinase; domain 1 43 379 - -
Lele25g0115 396 ProSiteProfiles Protein kinase domain profile. 56 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele25g0115 396 ProSitePatterns MAP kinase signature. 91 194 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lele25g0115 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Lele25g0115 396 CDD STKc_TEY_MAPK 50 385 - -
Lele25g0115 396 FunFam Mitogen-activated protein kinase 140 369 - -
Lele25g0115 396 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 55 353 - -
Lele25g0115 396 FunFam Mitogen-activated protein kinase 42 150 - -
Lele25g0115 396 Pfam Protein kinase domain 57 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0115 Lele-ChrLele25 725271 729633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0115 25 392 MAP Kinase Gene Family AT1G10210 86.413 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele25g0115 Pkinase 1.5e-71 CL0016