Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0108 ATGATGTACCCGAACCAAGCTTTTTCTTCTGGGTCCTACGCGGAGATGCTGTCTGGGAATTCTCTTTTAGCTCATAACTTCACAGAAACTGTAGGAAACCAAAATGAGGTGAAGTTCATGACAGCCGGTGACACTGTGGGCATGCAGTCTATCGACGGGCACTCCAACACTGCAACAGGTGATCCATCTGTCAACTCCTTCACAAGGACGCAATTGGGGCTCGTGGATAGTGAACAACACAACATACAGAGCCAGGGCTTATCTCTTAGCCTTGGCACACTCATGCCTGTCCCTCCCTTCCAATACCACTATCCCTCCGCCGGTTTTTCGTCTCTCATGACTCCAAATCTTCCTAACTTTAAGGGCACTGTTTCTCTTAAAGATGACGAGCCAAGTGCTGAGTGCATGGCACCTGTTTCTTCTGGAGGTTTTAACAGCTCCATCCAGAAGGAGGCTCTGTACAATCCACACTCCTCACTCTACCGCAAGGAAGTTCCCAATGATCCGTCGTGTCTGCATGGGACACAAGGTTTCTCCAACGCTGCCTTAAACTCTCAATACCTTAAAGCAGCTCAGGAATTGCTTGATGAAATAGTTAATGTACGAAAGTCTTTAAAGCAACCTGGACTGGAAAAGCAAAAAGGTTCCCGTGACATTGGATTAGATGGCTGCAAGGAGTCCGAGGAAAAGTCTACCAGTCAGTCTATGCAGAACCAGGATCCTAATGCTTCTTCTGCCAATGCATCGTGTGAATTGTCACCCGCAGAACGGCAGAATTTGTTGGATAAGAAGGCAAAGCTTTTGTCTATGTTAGACGAGGTAGATAAAAGATACCGCCAGTACTGCCATCAGATGCAAATGGTGGTATCATCTTTTGATATGGTTGCTGGTTGTGGGGCTGCTGAACCATACACTACGCTTGCTTTGCGAACAATTTCTCGCCATTTTCGCTGTTTGCGTGATGCTATTAGTGGTCAAATTCAAGTGACTCAGAGGAGCCTTGGAGAACAAGAGGGGATTCCTCGTCTCCGCTATGTTGATCAGCAGCTAAGGCAACAAAAGGCCCTTCAGCAGCTTGGCGTGATGCGACAAGCTTGGAGGCCCCAGAGGGGACTTCCTGAAAGCTCTGTTTCAATACTCCGTGCTTGGCTCTTTGAGCATTTCCTTCATCCTTACCCAAAGGATTCGGAGAAAATTATGCTGGCAAGGCAAACAGGCCTGACCAGGAACCAGGTGGCAAACTGGTTCATCAATGCAAGGGTGCGTCTTTGGAAGCCAATGGTTGAGGAAATGTACAAAGAAGAGTTTGGTGATTCTGAGATGGCAAGCTGCAATCTCTCATCTGAAAGTACTCCCCAAGCTCCAAGAGACAATAAAGGGGAAGAGTCGCAGGATAATGTGAAAGCTGCTAATAATGTCCAACATGGGCAGCTTCATGAATTGAAGCTAGACCATAGCTCCGCCACAGAATTTGATACTGCTCATGGAGAAGCTGTCATGCATTCTGGAATCATGAAATTGCAGGGTGATCAAAGGCCTAATATGAACAATACCCTTTATTCCAGCGGAACTATACCAACCAACCACAACGGTGATGGCTGCCTAATGCCTTCTGATCCAGCGGCCTCATACGATTTATCAGAGTTGGGTGGGTTTCCGGTGGGTGGCCACGTGTCTCTTGCGTTGGAGTTGCGCAACTGTGAAACTGGGGAATTTGCCACATCTGATAATGGTTTCAACAAACAACGTAACCAGACGTTAGGTTCTTCCCCAGAAAATAATTTGATTGATTATCATTTCACAGATTCAGGAAAGCAACAAGACAGGTTCAGTAATCCTCATCTACTGCATGAGTTTGTCGTCTAA 1866 0.4673 MMYPNQAFSSGSYAEMLSGNSLLAHNFTETVGNQNEVKFMTAGDTVGMQSIDGHSNTATGDPSVNSFTRTQLGLVDSEQHNIQSQGLSLSLGTLMPVPPFQYHYPSAGFSSLMTPNLPNFKGTVSLKDDEPSAECMAPVSSGGFNSSIQKEALYNPHSSLYRKEVPNDPSCLHGTQGFSNAALNSQYLKAAQELLDEIVNVRKSLKQPGLEKQKGSRDIGLDGCKESEEKSTSQSMQNQDPNASSANASCELSPAERQNLLDKKAKLLSMLDEVDKRYRQYCHQMQMVVSSFDMVAGCGAAEPYTTLALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMASCNLSSESTPQAPRDNKGEESQDNVKAANNVQHGQLHELKLDHSSATEFDTAHGEAVMHSGIMKLQGDQRPNMNNTLYSSGTIPTNHNGDGCLMPSDPAASYDLSELGGFPVGGHVSLALELRNCETGEFATSDNGFNKQRNQTLGSSPENNLIDYHFTDSGKQQDRFSNPHLLHEFVV 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0108 621 MobiDBLite consensus disorder prediction 573 593 - -
Lele25g0108 621 MobiDBLite consensus disorder prediction 230 252 - -
Lele25g0108 621 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 127 454 - -
Lele25g0108 621 ProSiteProfiles 'Homeobox' domain profile. 363 426 IPR001356 GO:0003677
Lele25g0108 621 Pfam Associated with HOX 183 324 IPR006563 -
Lele25g0108 621 CDD homeodomain 366 427 IPR001356 GO:0003677
Lele25g0108 621 SUPERFAMILY Homeodomain-like 367 434 IPR009057 -
Lele25g0108 621 SMART prehox3 176 325 IPR006563 -
Lele25g0108 621 MobiDBLite consensus disorder prediction 208 229 - -
Lele25g0108 621 MobiDBLite consensus disorder prediction 208 252 - -
Lele25g0108 621 MobiDBLite consensus disorder prediction 442 467 - -
Lele25g0108 621 Coils Coil 257 277 - -
Lele25g0108 621 Pfam Homeobox KN domain 383 422 IPR008422 GO:0003677|GO:0006355
Lele25g0108 621 SMART HOX_1 366 430 IPR001356 GO:0003677
Lele25g0108 621 Gene3D - 363 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0108 Lele-ChrLele25 704271 706543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0108 27 449 Homeobox Transcription Factor Family AT1G19700 48.206 6.31e-116 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele25g0108 POX 2.5e-50 No_clan